Wed 26 Dec 19:21:11 GMT 2018: starting 72428: build of gatb-core version 1.4.1+dfsg-3 arch armhf on mustang4 Running apt-get -q --download-only --only-source source gatb-core=1.4.1+dfsg-3 Reading package lists... NOTICE: 'gatb-core' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/gatb-core.git Please use: git clone https://salsa.debian.org/med-team/gatb-core.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 2,960 kB of source archives. Get:1 http://mirror/debian unstable/main gatb-core 1.4.1+dfsg-3 (dsc) [2,312 B] Get:2 http://mirror/debian unstable/main gatb-core 1.4.1+dfsg-3 (tar) [2,939 kB] Get:3 http://mirror/debian unstable/main gatb-core 1.4.1+dfsg-3 (diff) [19.4 kB] Fetched 2,960 kB in 0s (16.5 MB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'gatb-core_1.4.1+dfsg-3.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) total 2896 -rw-r--r-- 1 root root 19388 Dec 15 10:57 gatb-core_1.4.1+dfsg-3.debian.tar.xz -rw-r--r-- 1 root root 2312 Dec 15 10:57 gatb-core_1.4.1+dfsg-3.dsc -rw-r--r-- 1 root root 2938536 May 15 2018 gatb-core_1.4.1+dfsg.orig.tar.xz sbuild (Debian sbuild) 0.77.1 (10 September 2018) on mustang4 +==============================================================================+ | gatb-core 1.4.1+dfsg-3 (armhf) Wed, 26 Dec 2018 19:21:12 +0000 | +==============================================================================+ Package: gatb-core Version: 1.4.1+dfsg-3 Source Version: 1.4.1+dfsg-3 Distribution: sid Machine Architecture: arm64 Host Architecture: armhf Build Architecture: armhf Build Type: binary I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-armhf-sbuild-71832b57-4e9c-4bc5-b4d3-76a953d87a71' with '<>' I: NOTICE: Log filtering will replace 'build/gatb-core-fFB0IM/resolver-EWmyoE' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://mirror.einval.org/debian sid InRelease [237 kB] Ign:2 http://mirror.einval.org/debian sid/main armhf Packages.diff/Index Get:2 http://mirror.einval.org/debian sid/main armhf Packages.diff/Index [27.9 kB] Ign:2 http://mirror.einval.org/debian sid/main armhf Packages.diff/Index Get:3 http://mirror.einval.org/debian sid/main armhf Packages [8070 kB] Fetched 8308 kB in 3s (3047 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following package was automatically installed and is no longer required: libgpg-error-l10n Use 'apt autoremove' to remove it. The following NEW packages will be installed: libperl5.28 perl-modules-5.28 The following packages will be upgraded: apt binutils binutils-arm-linux-gnueabihf binutils-common bsdutils cpp cpp-8 dash debian-archive-keyring e2fsprogs fdisk g++ g++-8 gcc gcc-8 gcc-8-base gpgv grep init-system-helpers libapt-pkg5.0 libasan5 libatomic1 libbinutils libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcc1-0 libcom-err2 libdebconfclient0 libext2fs2 libfdisk1 libffi6 libgcc-8-dev libgcc1 libgcrypt20 libgdbm-compat4 libgdbm6 libgmp10 libgnutls30 libgomp1 libgpg-error-l10n libgpg-error0 libhogweed4 libmount1 libmpfr6 libnettle6 libsmartcols1 libss2 libstdc++-8-dev libstdc++6 libsystemd0 libubsan1 libudev1 libuuid1 linux-libc-dev mount perl perl-base sed sysvinit-utils tar tzdata util-linux 66 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 51.1 MB of archives. After this operation, 41.6 MB of additional disk space will be used. Get:1 http://mirror.einval.org/debian sid/main armhf libc6-dev armhf 2.28-3 [2148 kB] Get:2 http://mirror.einval.org/debian sid/main armhf libc-dev-bin armhf 2.28-3 [266 kB] Get:3 http://mirror.einval.org/debian sid/main armhf linux-libc-dev armhf 4.19.12-1 [1107 kB] Get:4 http://mirror.einval.org/debian sid/main armhf libc6 armhf 2.28-3 [2391 kB] Get:5 http://mirror.einval.org/debian sid/main armhf libc-bin armhf 2.28-3 [648 kB] Get:6 http://mirror.einval.org/debian sid/main armhf libubsan1 armhf 8.2.0-13 [105 kB] Get:7 http://mirror.einval.org/debian sid/main armhf gcc-8-base armhf 8.2.0-13 [188 kB] Get:8 http://mirror.einval.org/debian sid/main armhf libgcc1 armhf 1:8.2.0-13 [37.0 kB] Get:9 http://mirror.einval.org/debian sid/main armhf libgomp1 armhf 8.2.0-13 [64.7 kB] Get:10 http://mirror.einval.org/debian sid/main armhf libatomic1 armhf 8.2.0-13 [6740 B] Get:11 http://mirror.einval.org/debian sid/main armhf libasan5 armhf 8.2.0-13 [336 kB] Get:12 http://mirror.einval.org/debian sid/main armhf cpp-8 armhf 8.2.0-13 [5607 kB] Get:13 http://mirror.einval.org/debian sid/main armhf libcc1-0 armhf 8.2.0-13 [31.1 kB] Get:14 http://mirror.einval.org/debian sid/main armhf g++-8 armhf 8.2.0-13 [6083 kB] Get:15 http://mirror.einval.org/debian sid/main armhf gcc-8 armhf 8.2.0-13 [5982 kB] Get:16 http://mirror.einval.org/debian sid/main armhf libgcc-8-dev armhf 8.2.0-13 [613 kB] Get:17 http://mirror.einval.org/debian sid/main armhf libstdc++-8-dev armhf 8.2.0-13 [1575 kB] Get:18 http://mirror.einval.org/debian sid/main armhf libstdc++6 armhf 8.2.0-13 [337 kB] Get:19 http://mirror.einval.org/debian sid/main armhf libgmp10 armhf 2:6.1.2+dfsg-4 [205 kB] Get:20 http://mirror.einval.org/debian sid/main armhf libmpfr6 armhf 4.0.1-2 [717 kB] Get:21 http://mirror.einval.org/debian sid/main armhf libbinutils armhf 2.31.1-11 [303 kB] Get:22 http://mirror.einval.org/debian sid/main armhf binutils-common armhf 2.31.1-11 [2072 kB] Get:23 http://mirror.einval.org/debian sid/main armhf binutils armhf 2.31.1-11 [56.3 kB] Get:24 http://mirror.einval.org/debian sid/main armhf binutils-arm-linux-gnueabihf armhf 2.31.1-11 [2101 kB] Get:25 http://mirror.einval.org/debian sid/main armhf bsdutils armhf 1:2.33-0.2 [115 kB] Get:26 http://mirror.einval.org/debian sid/main armhf dash armhf 0.5.10.2-4 [104 kB] Get:27 http://mirror.einval.org/debian sid/main armhf grep armhf 3.1-3 [361 kB] Get:28 http://mirror.einval.org/debian sid/main armhf perl-modules-5.28 all 5.28.1-3 [2873 kB] Get:29 http://mirror.einval.org/debian sid/main armhf libperl5.28 armhf 5.28.1-3 [3221 kB] Get:30 http://mirror.einval.org/debian sid/main armhf perl armhf 5.28.1-3 [204 kB] Get:31 http://mirror.einval.org/debian sid/main armhf perl-base armhf 5.28.1-3 [1399 kB] Get:32 http://mirror.einval.org/debian sid/main armhf libgdbm6 armhf 1.18.1-2 [61.2 kB] Get:33 http://mirror.einval.org/debian sid/main armhf libgdbm-compat4 armhf 1.18.1-2 [43.6 kB] Get:34 http://mirror.einval.org/debian sid/main armhf sed armhf 4.7-1 [301 kB] Get:35 http://mirror.einval.org/debian sid/main armhf tar armhf 1.30+dfsg-3 [754 kB] Get:36 http://mirror.einval.org/debian sid/main armhf libsmartcols1 armhf 2.33-0.2 [138 kB] Get:37 http://mirror.einval.org/debian sid/main armhf libuuid1 armhf 2.33-0.2 [77.5 kB] Get:38 http://mirror.einval.org/debian sid/main armhf libblkid1 armhf 2.33-0.2 [179 kB] Get:39 http://mirror.einval.org/debian sid/main armhf libfdisk1 armhf 2.33-0.2 [220 kB] Get:40 http://mirror.einval.org/debian sid/main armhf libmount1 armhf 2.33-0.2 [191 kB] Get:41 http://mirror.einval.org/debian sid/main armhf fdisk armhf 2.33-0.2 [166 kB] Get:42 http://mirror.einval.org/debian sid/main armhf util-linux armhf 2.33-0.2 [983 kB] Get:43 http://mirror.einval.org/debian sid/main armhf libnettle6 armhf 3.4.1~rc1-1 [227 kB] Get:44 http://mirror.einval.org/debian sid/main armhf libhogweed4 armhf 3.4.1~rc1-1 [130 kB] Get:45 http://mirror.einval.org/debian sid/main armhf libgnutls30 armhf 3.6.5-2 [1038 kB] Get:46 http://mirror.einval.org/debian sid/main armhf libudev1 armhf 239-15 [130 kB] Get:47 http://mirror.einval.org/debian sid/main armhf libapt-pkg5.0 armhf 1.8.0~alpha3 [873 kB] Get:48 http://mirror.einval.org/debian sid/main armhf libgpg-error-l10n all 1.33-3 [97.4 kB] Get:49 http://mirror.einval.org/debian sid/main armhf libgpg-error0 armhf 1.33-3 [62.3 kB] Get:50 http://mirror.einval.org/debian sid/main armhf libgcrypt20 armhf 1.8.4-4 [501 kB] Get:51 http://mirror.einval.org/debian sid/main armhf gpgv armhf 2.2.12-1 [553 kB] Get:52 http://mirror.einval.org/debian sid/main armhf debian-archive-keyring all 2018.1 [57.4 kB] Get:53 http://mirror.einval.org/debian sid/main armhf apt armhf 1.8.0~alpha3 [1255 kB] Get:54 http://mirror.einval.org/debian sid/main armhf init-system-helpers all 1.56+nmu1 [46.8 kB] Get:55 http://mirror.einval.org/debian sid/main armhf sysvinit-utils armhf 2.93-1 [75.5 kB] Get:56 http://mirror.einval.org/debian sid/main armhf libsystemd0 armhf 239-15 [274 kB] Get:57 http://mirror.einval.org/debian sid/main armhf libext2fs2 armhf 1.44.5-1 [206 kB] Get:58 http://mirror.einval.org/debian sid/main armhf e2fsprogs armhf 1.44.5-1 [552 kB] Get:59 http://mirror.einval.org/debian sid/main armhf mount armhf 2.33-0.2 [166 kB] Get:60 http://mirror.einval.org/debian sid/main armhf libcap-ng0 armhf 0.7.9-1+b1 [13.2 kB] Get:61 http://mirror.einval.org/debian sid/main armhf libdebconfclient0 armhf 0.246 [48.4 kB] Get:62 http://mirror.einval.org/debian sid/main armhf libffi6 armhf 3.2.1-9 [18.9 kB] Get:63 http://mirror.einval.org/debian sid/main armhf tzdata all 2018g-1 [255 kB] Get:64 http://mirror.einval.org/debian sid/main armhf g++ armhf 4:8.2.0-2 [1624 B] Get:65 http://mirror.einval.org/debian sid/main armhf gcc armhf 4:8.2.0-2 [5204 B] Get:66 http://mirror.einval.org/debian sid/main armhf cpp armhf 4:8.2.0-2 [19.3 kB] Get:67 http://mirror.einval.org/debian sid/main armhf libcom-err2 armhf 1.44.5-1 [67.4 kB] Get:68 http://mirror.einval.org/debian sid/main armhf libss2 armhf 1.44.5-1 [70.8 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 51.1 MB in 1s (46.4 MB/s) (Reading database ... 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Preparing to unpack .../4-libcom-err2_1.44.5-1_armhf.deb ... Unpacking libcom-err2:armhf (1.44.5-1) over (1.44.4-2) ... Preparing to unpack .../5-libss2_1.44.5-1_armhf.deb ... Unpacking libss2:armhf (1.44.5-1) over (1.44.4-2) ... Setting up libcom-err2:armhf (1.44.5-1) ... Setting up libgomp1:armhf (8.2.0-13) ... Setting up libatomic1:armhf (8.2.0-13) ... Setting up libss2:armhf (1.44.5-1) ... Setting up libcc1-0:armhf (8.2.0-13) ... Setting up libgpg-error-l10n (1.33-3) ... Setting up tzdata (2018g-1) ... Current default time zone: 'Etc/UTC' Local time is now: Wed Dec 26 19:23:03 UTC 2018. Universal Time is now: Wed Dec 26 19:23:03 UTC 2018. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up linux-libc-dev:armhf (4.19.12-1) ... Setting up libmpfr6:armhf (4.0.1-2) ... Setting up mount (2.33-0.2) ... Setting up e2fsprogs (1.44.5-1) ... Setting up libgdbm6:armhf (1.18.1-2) ... Setting up binutils-common:armhf (2.31.1-11) ... Setting up perl-modules-5.28 (5.28.1-3) ... Processing triggers for libc-bin (2.28-3) ... Setting up libc-dev-bin (2.28-3) ... Setting up libgdbm-compat4:armhf (1.18.1-2) ... Setting up libc6-dev:armhf (2.28-3) ... Setting up libasan5:armhf (8.2.0-13) ... Setting up libubsan1:armhf (8.2.0-13) ... Setting up cpp-8 (8.2.0-13) ... Setting up cpp (4:8.2.0-2) ... Setting up libbinutils:armhf (2.31.1-11) ... Setting up libperl5.28:armhf (5.28.1-3) ... Setting up binutils-arm-linux-gnueabihf (2.31.1-11) ... Setting up perl (5.28.1-3) ... Setting up libgcc-8-dev:armhf (8.2.0-13) ... Setting up binutils (2.31.1-11) ... Setting up libstdc++-8-dev:armhf (8.2.0-13) ... Setting up gcc-8 (8.2.0-13) ... Setting up g++-8 (8.2.0-13) ... Setting up gcc (4:8.2.0-2) ... Setting up g++ (4:8.2.0-2) ... Processing triggers for libc-bin (2.28-3) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- /chroot/rebuildd/build-gatb-core-armhf/gatb-core_1.4.1+dfsg-3.dsc exists in /chroot/rebuildd/build-gatb-core-armhf; copying to chroot I: NOTICE: Log filtering will replace 'build/gatb-core-fFB0IM/gatb-core-1.4.1+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/gatb-core-fFB0IM' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper (>= 11~), d-shlibs, cmake, libcppunit-dev, libhdf5-dev, libboost-dev, libjsoncpp-dev, doxygen, graphviz, build-essential, fakeroot Filtered Build-Depends: debhelper (>= 11~), d-shlibs, cmake, libcppunit-dev, libhdf5-dev, libboost-dev, libjsoncpp-dev, doxygen, graphviz, build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-main-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [421 B] Get:5 copy:/<>/apt_archive ./ Packages [504 B] Fetched 1882 B in 0s (105 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libgpg-error-l10n Use 'apt autoremove' to remove it. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism doxygen dwz file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base graphviz groff-base hdf5-helpers intltool-debian libaec-dev libaec0 libarchive-zip-perl libarchive13 libboost-dev libboost1.67-dev libbsd0 libcairo2 libcdt5 libcgraph6 libclang1-6.0 libcppunit-1.14-0 libcppunit-dev libcroco3 libcurl4 libdatrie1 libedit2 libelf1 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0 libgd3 libgfortran5 libglib2.0-0 libgraphite2-3 libgssapi-krb5-2 libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz0b libhdf5-103 libhdf5-cpp-103 libhdf5-dev libice6 libicu63 libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjsoncpp-dev libjsoncpp1 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblab-gamut1 libldap-2.4-2 libldap-common libllvm6.0 libltdl7 libmagic-mgc libmagic1 libncurses6 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4 libpipeline1 libpixman-1-0 libpng16-16 libprocps7 libpsl5 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6 libssh2-1 libssl1.1 libsz2 libthai-data libthai0 libtiff5 libtool libuchardet0 libuv1 libwebp6 libx11-6 libx11-data libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxdot4 libxext6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 lsb-base m4 man-db po-debconf procps sensible-utils ucf x11-common zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation cmake-doc ninja-build dh-make doxygen-latex doxygen-doc doxygen-gui gettext-doc libasprintf-dev libgettextpo-dev gsfonts graphviz-doc groff lrzip libboost-doc libboost1.67-doc libboost-atomic1.67-dev libboost-chrono1.67-dev libboost-container1.67-dev libboost-context1.67-dev libboost-coroutine1.67-dev libboost-date-time1.67-dev libboost-exception1.67-dev libboost-fiber1.67-dev libboost-filesystem1.67-dev libboost-graph1.67-dev libboost-graph-parallel1.67-dev libboost-iostreams1.67-dev libboost-locale1.67-dev libboost-log1.67-dev libboost-math1.67-dev libboost-mpi1.67-dev libboost-mpi-python1.67-dev libboost-numpy1.67-dev libboost-program-options1.67-dev libboost-python1.67-dev libboost-random1.67-dev libboost-regex1.67-dev libboost-serialization1.67-dev libboost-signals1.67-dev libboost-stacktrace1.67-dev libboost-system1.67-dev libboost-test1.67-dev libboost-thread1.67-dev libboost-timer1.67-dev libboost-type-erasure1.67-dev libboost-wave1.67-dev libboost1.67-tools-dev libmpfrc++-dev libntl-dev libcppunit-doc libgd-tools krb5-doc krb5-user libhdf5-doc libtool-doc gfortran | fortran95-compiler gcj-jdk xapian-tools m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx fonts-liberation ca-certificates libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgts-bin krb5-locales libgpm2 publicsuffix libsasl2-modules libltdl-dev libmail-sendmail-perl psmisc The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism doxygen dwz file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base graphviz groff-base hdf5-helpers intltool-debian libaec-dev libaec0 libarchive-zip-perl libarchive13 libboost-dev libboost1.67-dev libbsd0 libcairo2 libcdt5 libcgraph6 libclang1-6.0 libcppunit-1.14-0 libcppunit-dev libcroco3 libcurl4 libdatrie1 libedit2 libelf1 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0 libgd3 libgfortran5 libglib2.0-0 libgraphite2-3 libgssapi-krb5-2 libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz0b libhdf5-103 libhdf5-cpp-103 libhdf5-dev libice6 libicu63 libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjsoncpp-dev libjsoncpp1 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblab-gamut1 libldap-2.4-2 libldap-common libllvm6.0 libltdl7 libmagic-mgc libmagic1 libncurses6 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4 libpipeline1 libpixman-1-0 libpng16-16 libprocps7 libpsl5 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6 libssh2-1 libssl1.1 libsz2 libthai-data libthai0 libtiff5 libtool libuchardet0 libuv1 libwebp6 libx11-6 libx11-data libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxdot4 libxext6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 lsb-base m4 man-db po-debconf procps sbuild-build-depends-main-dummy sensible-utils ucf x11-common zlib1g-dev 0 upgraded, 130 newly installed, 0 to remove and 0 not upgraded. Need to get 74.3 MB of archives. After this operation, 333 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [920 B] Get:2 http://mirror.einval.org/debian sid/main armhf libbsd0 armhf 0.9.1-1 [107 kB] Get:3 http://mirror.einval.org/debian sid/main armhf bsdmainutils armhf 11.1.2+b1 [186 kB] Get:4 http://mirror.einval.org/debian sid/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB] Get:5 http://mirror.einval.org/debian sid/main armhf groff-base armhf 1.22.4-1 [829 kB] Get:6 http://mirror.einval.org/debian sid/main armhf libpipeline1 armhf 1.5.0-2 [25.3 kB] Get:7 http://mirror.einval.org/debian sid/main armhf man-db armhf 2.8.4-3 [1168 kB] Get:8 http://mirror.einval.org/debian sid/main armhf libncurses6 armhf 6.1+20181013-1 [79.6 kB] Get:9 http://mirror.einval.org/debian sid/main armhf libprocps7 armhf 2:3.3.15-2 [58.7 kB] Get:10 http://mirror.einval.org/debian sid/main armhf lsb-base all 10.2018112800 [28.3 kB] Get:11 http://mirror.einval.org/debian sid/main armhf procps armhf 2:3.3.15-2 [248 kB] Get:12 http://mirror.einval.org/debian sid/main armhf sensible-utils all 0.0.12 [15.8 kB] Get:13 http://mirror.einval.org/debian sid/main armhf libmagic-mgc armhf 1:5.34-2 [239 kB] Get:14 http://mirror.einval.org/debian sid/main armhf libmagic1 armhf 1:5.34-2 [108 kB] Get:15 http://mirror.einval.org/debian sid/main armhf file armhf 1:5.34-2 [64.9 kB] Get:16 http://mirror.einval.org/debian sid/main armhf gettext-base armhf 0.19.8.1-9 [118 kB] Get:17 http://mirror.einval.org/debian sid/main armhf ucf all 3.0038+nmu1 [69.0 kB] Get:18 http://mirror.einval.org/debian sid/main armhf libsigsegv2 armhf 2.12-2 [32.1 kB] Get:19 http://mirror.einval.org/debian sid/main armhf m4 armhf 1.4.18-2 [190 kB] Get:20 http://mirror.einval.org/debian sid/main armhf autoconf all 2.69-11 [341 kB] Get:21 http://mirror.einval.org/debian sid/main armhf autotools-dev all 20180224.1 [77.0 kB] Get:22 http://mirror.einval.org/debian sid/main armhf automake all 1:1.16.1-4 [771 kB] Get:23 http://mirror.einval.org/debian sid/main armhf autopoint all 0.19.8.1-9 [434 kB] Get:24 http://mirror.einval.org/debian sid/main armhf cmake-data all 3.13.2-1 [1476 kB] Get:25 http://mirror.einval.org/debian sid/main armhf libicu63 armhf 63.1-5 [8001 kB] Get:26 http://mirror.einval.org/debian sid/main armhf libxml2 armhf 2.9.4+dfsg1-7+b3 [595 kB] Get:27 http://mirror.einval.org/debian sid/main armhf libarchive13 armhf 3.3.3-2 [276 kB] Get:28 http://mirror.einval.org/debian sid/main armhf libkeyutils1 armhf 1.5.9-9.3 [12.0 kB] Get:29 http://mirror.einval.org/debian sid/main armhf libkrb5support0 armhf 1.16.1-1 [59.2 kB] Get:30 http://mirror.einval.org/debian sid/main armhf libk5crypto3 armhf 1.16.1-1 [119 kB] Get:31 http://mirror.einval.org/debian sid/main armhf libkrb5-3 armhf 1.16.1-1 [271 kB] Get:32 http://mirror.einval.org/debian sid/main armhf libgssapi-krb5-2 armhf 1.16.1-1 [137 kB] Get:33 http://mirror.einval.org/debian sid/main armhf libsasl2-modules-db armhf 2.1.27~rc8-1 [66.7 kB] Get:34 http://mirror.einval.org/debian sid/main armhf libsasl2-2 armhf 2.1.27~rc8-1 [97.9 kB] Get:35 http://mirror.einval.org/debian sid/main armhf libldap-common all 2.4.47+dfsg-1 [88.8 kB] Get:36 http://mirror.einval.org/debian sid/main armhf libldap-2.4-2 armhf 2.4.47+dfsg-1 [201 kB] Get:37 http://mirror.einval.org/debian sid/main armhf libnghttp2-14 armhf 1.35.1-1 [71.4 kB] Get:38 http://mirror.einval.org/debian sid/main armhf libpsl5 armhf 0.20.2-2 [52.4 kB] Get:39 http://mirror.einval.org/debian sid/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2 [54.9 kB] Get:40 http://mirror.einval.org/debian sid/main armhf libssh2-1 armhf 1.8.0-2 [128 kB] Get:41 http://mirror.einval.org/debian sid/main armhf libssl1.1 armhf 1.1.1a-1 [1290 kB] Get:42 http://mirror.einval.org/debian sid/main armhf libcurl4 armhf 7.62.0-1 [290 kB] Get:43 http://mirror.einval.org/debian sid/main armhf libexpat1 armhf 2.2.6-1 [77.6 kB] Get:44 http://mirror.einval.org/debian sid/main armhf libjsoncpp1 armhf 1.7.4-3 [67.8 kB] Get:45 http://mirror.einval.org/debian sid/main armhf librhash0 armhf 1.3.6-3 [99.3 kB] Get:46 http://mirror.einval.org/debian sid/main armhf libuv1 armhf 1.24.0-1 [97.6 kB] Get:47 http://mirror.einval.org/debian sid/main armhf cmake armhf 3.13.2-1 [2847 kB] Get:48 http://mirror.einval.org/debian sid/main armhf d-shlibs all 0.83 [17.1 kB] Get:49 http://mirror.einval.org/debian sid/main armhf libtool all 2.4.6-6 [547 kB] Get:50 http://mirror.einval.org/debian sid/main armhf dh-autoreconf all 19 [16.9 kB] Get:51 http://mirror.einval.org/debian sid/main armhf libarchive-zip-perl all 1.64-1 [96.8 kB] Get:52 http://mirror.einval.org/debian sid/main armhf libfile-stripnondeterminism-perl all 1.0.0-1 [19.5 kB] Get:53 http://mirror.einval.org/debian sid/main armhf dh-strip-nondeterminism all 1.0.0-1 [12.5 kB] Get:54 http://mirror.einval.org/debian sid/main armhf libelf1 armhf 0.175-1 [157 kB] Get:55 http://mirror.einval.org/debian sid/main armhf dwz armhf 0.12-3 [72.0 kB] Get:56 http://mirror.einval.org/debian sid/main armhf libglib2.0-0 armhf 2.58.1-2 [1072 kB] Get:57 http://mirror.einval.org/debian sid/main armhf libcroco3 armhf 0.6.12-2 [133 kB] Get:58 http://mirror.einval.org/debian sid/main armhf gettext armhf 0.19.8.1-9 [1242 kB] Get:59 http://mirror.einval.org/debian sid/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB] Get:60 http://mirror.einval.org/debian sid/main armhf po-debconf all 1.0.21 [248 kB] Get:61 http://mirror.einval.org/debian sid/main armhf debhelper all 12 [1002 kB] Get:62 http://mirror.einval.org/debian sid/main armhf libedit2 armhf 3.1-20181209-1 [79.5 kB] Get:63 http://mirror.einval.org/debian sid/main armhf libllvm6.0 armhf 1:6.0.1-9.2 [13.1 MB] Get:64 http://mirror.einval.org/debian sid/main armhf libclang1-6.0 armhf 1:6.0.1-9.2 [6032 kB] Get:65 http://mirror.einval.org/debian sid/main armhf libxapian30 armhf 1.4.9-1 [980 kB] Get:66 http://mirror.einval.org/debian sid/main armhf doxygen armhf 1.8.13-10 [3568 kB] Get:67 http://mirror.einval.org/debian sid/main armhf libpng16-16 armhf 1.6.34-2 [271 kB] Get:68 http://mirror.einval.org/debian sid/main armhf libfreetype6 armhf 2.9.1-3 [322 kB] Get:69 http://mirror.einval.org/debian sid/main armhf fonts-dejavu-core all 2.37-1 [1068 kB] Get:70 http://mirror.einval.org/debian sid/main armhf fontconfig-config all 2.13.1-2 [280 kB] Get:71 http://mirror.einval.org/debian sid/main armhf libfontconfig1 armhf 2.13.1-2 [328 kB] Get:72 http://mirror.einval.org/debian sid/main armhf fontconfig armhf 2.13.1-2 [404 kB] Get:73 http://mirror.einval.org/debian sid/main armhf libpixman-1-0 armhf 0.36.0-1 [465 kB] Get:74 http://mirror.einval.org/debian sid/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB] Get:75 http://mirror.einval.org/debian sid/main armhf libxdmcp6 armhf 1:1.1.2-3 [24.9 kB] Get:76 http://mirror.einval.org/debian sid/main armhf libxcb1 armhf 1.13.1-2 [132 kB] Get:77 http://mirror.einval.org/debian sid/main armhf libx11-data all 2:1.6.7-1 [298 kB] Get:78 http://mirror.einval.org/debian sid/main armhf libx11-6 armhf 2:1.6.7-1 [698 kB] Get:79 http://mirror.einval.org/debian sid/main armhf libxcb-render0 armhf 1.13.1-2 [108 kB] Get:80 http://mirror.einval.org/debian sid/main armhf libxcb-shm0 armhf 1.13.1-2 [99.0 kB] Get:81 http://mirror.einval.org/debian sid/main armhf libxext6 armhf 2:1.3.3-1+b2 [48.1 kB] Get:82 http://mirror.einval.org/debian sid/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB] Get:83 http://mirror.einval.org/debian sid/main armhf libcairo2 armhf 1.16.0-2 [617 kB] Get:84 http://mirror.einval.org/debian sid/main armhf libcdt5 armhf 2.40.1-5+b2 [58.4 kB] Get:85 http://mirror.einval.org/debian sid/main armhf libcgraph6 armhf 2.40.1-5+b2 [77.5 kB] Get:86 http://mirror.einval.org/debian sid/main armhf libjpeg62-turbo armhf 1:1.5.2-2+b1 [112 kB] Get:87 http://mirror.einval.org/debian sid/main armhf libjbig0 armhf 2.1-3.1+b2 [28.4 kB] Get:88 http://mirror.einval.org/debian sid/main armhf libwebp6 armhf 0.6.1-2 [229 kB] Get:89 http://mirror.einval.org/debian sid/main armhf libtiff5 armhf 4.0.10-3 [239 kB] Get:90 http://mirror.einval.org/debian sid/main armhf libxpm4 armhf 1:3.5.12-1 [44.0 kB] Get:91 http://mirror.einval.org/debian sid/main armhf libgd3 armhf 2.2.5-5 [116 kB] Get:92 http://mirror.einval.org/debian sid/main armhf libgts-0.7-5 armhf 0.7.6+darcs121130-4 [137 kB] Get:93 http://mirror.einval.org/debian sid/main armhf libltdl7 armhf 2.4.6-6 [387 kB] Get:94 http://mirror.einval.org/debian sid/main armhf libfribidi0 armhf 1.0.5-3 [61.3 kB] Get:95 http://mirror.einval.org/debian sid/main armhf libthai-data all 0.1.28-1 [170 kB] Get:96 http://mirror.einval.org/debian sid/main armhf libdatrie1 armhf 0.2.12-1 [35.7 kB] Get:97 http://mirror.einval.org/debian sid/main armhf libthai0 armhf 0.1.28-1 [50.6 kB] Get:98 http://mirror.einval.org/debian sid/main armhf libpango-1.0-0 armhf 1.42.4-5 [169 kB] Get:99 http://mirror.einval.org/debian sid/main armhf libgraphite2-3 armhf 1.3.12-1 [69.8 kB] Get:100 http://mirror.einval.org/debian sid/main armhf libharfbuzz0b armhf 2.3.0-1 [1139 kB] Get:101 http://mirror.einval.org/debian sid/main armhf libpangoft2-1.0-0 armhf 1.42.4-5 [62.2 kB] Get:102 http://mirror.einval.org/debian sid/main armhf libpangocairo-1.0-0 armhf 1.42.4-5 [51.7 kB] Get:103 http://mirror.einval.org/debian sid/main armhf libpathplan4 armhf 2.40.1-5+b2 [61.6 kB] Get:104 http://mirror.einval.org/debian sid/main armhf libxdot4 armhf 2.40.1-5+b2 [55.7 kB] Get:105 http://mirror.einval.org/debian sid/main armhf libgvc6 armhf 2.40.1-5+b2 [557 kB] Get:106 http://mirror.einval.org/debian sid/main armhf libgvpr2 armhf 2.40.1-5+b2 [189 kB] Get:107 http://mirror.einval.org/debian sid/main armhf x11-common all 1:7.7+19 [251 kB] Get:108 http://mirror.einval.org/debian sid/main armhf libice6 armhf 2:1.0.9-2 [51.7 kB] Get:109 http://mirror.einval.org/debian sid/main armhf liblab-gamut1 armhf 2.40.1-5+b2 [220 kB] Get:110 http://mirror.einval.org/debian sid/main armhf libsm6 armhf 2:1.2.2-1+b3 [31.3 kB] Get:111 http://mirror.einval.org/debian sid/main armhf libxt6 armhf 1:1.1.5-1 [158 kB] Get:112 http://mirror.einval.org/debian sid/main armhf libxmu6 armhf 2:1.1.2-2 [52.5 kB] Get:113 http://mirror.einval.org/debian sid/main armhf libxaw7 armhf 2:1.0.13-1+b2 [167 kB] Get:114 http://mirror.einval.org/debian sid/main armhf graphviz armhf 2.40.1-5+b2 [518 kB] Get:115 http://mirror.einval.org/debian sid/main armhf hdf5-helpers armhf 1.10.4+repack-2 [33.4 kB] Get:116 http://mirror.einval.org/debian sid/main armhf libaec0 armhf 1.0.2-1 [21.9 kB] Get:117 http://mirror.einval.org/debian sid/main armhf libsz2 armhf 1.0.2-1 [6584 B] Get:118 http://mirror.einval.org/debian sid/main armhf libaec-dev armhf 1.0.2-1 [19.7 kB] Get:119 http://mirror.einval.org/debian sid/main armhf libboost1.67-dev armhf 1.67.0-11 [8386 kB] Get:120 http://mirror.einval.org/debian sid/main armhf libboost-dev armhf 1.67.0.1 [3860 B] Get:121 http://mirror.einval.org/debian sid/main armhf libcppunit-1.14-0 armhf 1.14.0-3 [131 kB] Get:122 http://mirror.einval.org/debian sid/main armhf libcppunit-dev armhf 1.14.0-3 [193 kB] Get:123 http://mirror.einval.org/debian sid/main armhf libgfortran5 armhf 8.2.0-13 [211 kB] Get:124 http://mirror.einval.org/debian sid/main armhf libhdf5-103 armhf 1.10.4+repack-2 [1283 kB] Get:125 http://mirror.einval.org/debian sid/main armhf libhdf5-cpp-103 armhf 1.10.4+repack-2 [122 kB] Get:126 http://mirror.einval.org/debian sid/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-1 [207 kB] Get:127 http://mirror.einval.org/debian sid/main armhf libjpeg62-turbo-dev armhf 1:1.5.2-2+b1 [182 kB] Get:128 http://mirror.einval.org/debian sid/main armhf libjpeg-dev all 1:1.5.2-2 [57.5 kB] Get:129 http://mirror.einval.org/debian sid/main armhf libhdf5-dev armhf 1.10.4+repack-2 [2515 kB] Get:130 http://mirror.einval.org/debian sid/main armhf libjsoncpp-dev armhf 1.7.4-3 [79.7 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 74.3 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(Reading database ... 13402 files and directories currently installed.) Preparing to unpack .../000-libbsd0_0.9.1-1_armhf.deb ... Unpacking libbsd0:armhf (0.9.1-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../001-bsdmainutils_11.1.2+b1_armhf.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../002-libuchardet0_0.0.6-3_armhf.deb ... Unpacking libuchardet0:armhf (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../003-groff-base_1.22.4-1_armhf.deb ... Unpacking groff-base (1.22.4-1) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../004-libpipeline1_1.5.0-2_armhf.deb ... Unpacking libpipeline1:armhf (1.5.0-2) ... Selecting previously unselected package man-db. Preparing to unpack .../005-man-db_2.8.4-3_armhf.deb ... Unpacking man-db (2.8.4-3) ... 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Setting up libxdot4 (2.40.1-5+b2) ... Setting up libjpeg62-turbo:armhf (1:1.5.2-2+b1) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libnghttp2-14:armhf (1.35.1-1) ... Setting up libprocps7:armhf (2:3.3.15-2) ... Setting up libicu63:armhf (63.1-5) ... Setting up libpng16-16:armhf (1.6.34-2) ... Setting up libjbig0:armhf (2.1-3.1+b2) ... Setting up libsigsegv2:armhf (2.12-2) ... Setting up libldap-common (2.4.47+dfsg-1) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up libuv1:armhf (1.24.0-1) ... Setting up libpsl5:armhf (0.20.2-2) ... Setting up libelf1:armhf (0.175-1) ... Setting up libglib2.0-0:armhf (2.58.1-2) ... No schema files found: doing nothing. Setting up libcppunit-dev (1.14.0-3) ... Setting up d-shlibs (0.83) ... Setting up libdatrie1:armhf (0.2.12-1) ... Setting up gettext-base (0.19.8.1-9) ... Setting up cmake-data (3.13.2-1) ... Setting up libpipeline1:armhf (1.5.0-2) ... Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2) ... Setting up m4 (1.4.18-2) ... Setting up libbsd0:armhf (0.9.1-1) ... Setting up libxml2:armhf (2.9.4+dfsg1-7+b3) ... Setting up libuchardet0:armhf (0.0.6-3) ... Setting up libfreetype6:armhf (2.9.1-3) ... Setting up libmagic-mgc (1:5.34-2) ... Setting up libmagic1:armhf (1:5.34-2) ... Setting up lsb-base (10.2018112800) ... Setting up libgraphite2-3:armhf (1.3.12-1) ... Setting up librhash0:armhf (1.3.6-3) ... Setting up libcroco3:armhf (0.6.12-2) ... Setting up sensible-utils (0.0.12) ... Setting up libpixman-1-0:armhf (0.36.0-1) ... Setting up libssh2-1:armhf (1.8.0-2) ... Processing triggers for libc-bin (2.28-3) ... Setting up dwz (0.12-3) ... Setting up autotools-dev (20180224.1) ... Setting up libboost1.67-dev:armhf (1.67.0-11) ... Setting up libssl1.1:armhf (1.1.1a-1) ... Setting up libltdl7:armhf (2.4.6-6) ... Setting up libfribidi0:armhf (1.0.5-3) ... Setting up libboost-dev:armhf (1.67.0.1) ... Setting up libthai-data (0.1.28-1) ... Setting up libjpeg62-turbo-dev:armhf (1:1.5.2-2+b1) ... Setting up libxdmcp6:armhf (1:1.1.2-3) ... Setting up libkeyutils1:armhf (1.5.9-9.3) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up x11-common (1:7.7+19) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults invoke-rc.d: could not determine current runlevel All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of start. Setting up libgfortran5:armhf (8.2.0-13) ... Setting up hdf5-helpers (1.10.4+repack-2) ... Setting up libncurses6:armhf (6.1+20181013-1) ... Setting up libcdt5 (2.40.1-5+b2) ... Setting up libx11-data (2:1.6.7-1) ... Setting up libxau6:armhf (1:1.0.8-1+b2) ... Setting up autopoint (0.19.8.1-9) ... Setting up libcgraph6 (2.40.1-5+b2) ... Setting up libsz2:armhf (1.0.2-1) ... Setting up libwebp6:armhf (0.6.1-2) ... Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-1) ... Setting up libfile-stripnondeterminism-perl (1.0.0-1) ... Setting up libjsoncpp1:armhf (1.7.4-3) ... Setting up libjsoncpp-dev:armhf (1.7.4-3) ... Setting up libedit2:armhf (3.1-20181209-1) ... Setting up libgts-0.7-5:armhf (0.7.6+darcs121130-4) ... Setting up libllvm6.0:armhf (1:6.0.1-9.2) ... Setting up gettext (0.19.8.1-9) ... Setting up libarchive13:armhf (3.3.3-2) ... Setting up libgvpr2 (2.40.1-5+b2) ... Setting up groff-base (1.22.4-1) ... Setting up libaec-dev:armhf (1.0.2-1) ... Setting up libclang1-6.0:armhf (1:6.0.1-9.2) ... Setting up libharfbuzz0b:armhf (2.3.0-1) ... Setting up libtiff5:armhf (4.0.10-3) ... Setting up autoconf (2.69-11) ... Setting up libthai0:armhf (0.1.28-1) ... Setting up libhdf5-103:armhf (1.10.4+repack-2) ... Setting up file (1:5.34-2) ... Setting up libkrb5support0:armhf (1.16.1-1) ... Setting up ucf (3.0038+nmu1) ... Setting up procps (2:3.3.15-2) ... update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode Setting up intltool-debian (0.35.0+20060710.4) ... Setting up libjpeg-dev (1:1.5.2-2) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libice6:armhf (2:1.0.9-2) ... Setting up man-db (2.8.4-3) ... Not building database; man-db/auto-update is not 'true'. Setting up libxcb1:armhf (1.13.1-2) ... Setting up libtool (2.4.6-6) ... Setting up libsm6:armhf (2:1.2.2-1+b3) ... Setting up libk5crypto3:armhf (1.16.1-1) ... Setting up fontconfig-config (2.13.1-2) ... Setting up libxcb-render0:armhf (1.13.1-2) ... Setting up po-debconf (1.0.21) ... Setting up libx11-6:armhf (2:1.6.7-1) ... Setting up doxygen (1.8.13-10) ... Setting up libhdf5-cpp-103:armhf (1.10.4+repack-2) ... Setting up libhdf5-dev (1.10.4+repack-2) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-serial.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libxcb-shm0:armhf (1.13.1-2) ... Setting up libxpm4:armhf (1:3.5.12-1) ... Setting up libxt6:armhf (1:1.1.5-1) ... Setting up libxrender1:armhf (1:0.9.10-1) ... Setting up libkrb5-3:armhf (1.16.1-1) ... Setting up libfontconfig1:armhf (2.13.1-2) ... Setting up libxext6:armhf (2:1.3.3-1+b2) ... Setting up libgd3:armhf (2.2.5-5) ... Setting up libxmu6:armhf (2:1.1.2-2) ... Setting up libgssapi-krb5-2:armhf (1.16.1-1) ... Setting up fontconfig (2.13.1-2) ... Regenerating fonts cache... done. Setting up libxaw7:armhf (2:1.0.13-1+b2) ... Setting up libcairo2:armhf (1.16.0-2) ... Setting up libsasl2-modules-db:armhf (2.1.27~rc8-1) ... Setting up libsasl2-2:armhf (2.1.27~rc8-1) ... Setting up libldap-2.4-2:armhf (2.4.47+dfsg-1) ... Setting up libpango-1.0-0:armhf (1.42.4-5) ... Setting up libcurl4:armhf (7.62.0-1) ... Setting up libpangoft2-1.0-0:armhf (1.42.4-5) ... Setting up cmake (3.13.2-1) ... Setting up libpangocairo-1.0-0:armhf (1.42.4-5) ... Setting up libgvc6 (2.40.1-5+b2) ... Setting up graphviz (2.40.1-5+b2) ... Setting up debhelper (12) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.0.0-1) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.28-3) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-8-arm64 #1 SMP Debian 4.9.130-2 (2018-10-27) arm64 (aarch64) Toolchain package versions: binutils_2.31.1-11 dpkg-dev_1.19.2 g++-8_8.2.0-13 gcc-8_8.2.0-13 libc6-dev_2.28-3 libstdc++-8-dev_8.2.0-13 libstdc++6_8.2.0-13 linux-libc-dev_4.19.12-1 Package versions: adduser_3.118 apt_1.8.0~alpha3 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1 base-passwd_3.5.45 bash_4.4.18-3.1 binutils_2.31.1-11 binutils-arm-linux-gnueabihf_2.31.1-11 binutils-common_2.31.1-11 bsdmainutils_11.1.2+b1 bsdutils_1:2.33-0.2 build-essential_12.5 bzip2_1.0.6-9 cmake_3.13.2-1 cmake-data_3.13.2-1 coreutils_8.30-1 cpp_4:8.2.0-2 cpp-8_8.2.0-13 d-shlibs_0.83 dash_0.5.10.2-4 debconf_1.5.69 debhelper_12 debian-archive-keyring_2018.1 debianutils_4.8.6 dh-autoreconf_19 dh-strip-nondeterminism_1.0.0-1 diffutils_1:3.6-1 doxygen_1.8.13-10 dpkg_1.19.2 dpkg-dev_1.19.2 dwz_0.12-3 e2fsprogs_1.44.5-1 fakeroot_1.23-1 fdisk_2.33-0.2 file_1:5.34-2 findutils_4.6.0+git+20181018-1 fontconfig_2.13.1-2 fontconfig-config_2.13.1-2 fonts-dejavu-core_2.37-1 g++_4:8.2.0-2 g++-8_8.2.0-13 gcc_4:8.2.0-2 gcc-8_8.2.0-13 gcc-8-base_8.2.0-13 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpgv_2.2.12-1 graphviz_2.40.1-5+b2 grep_3.1-3 groff-base_1.22.4-1 gzip_1.9-2.1 hdf5-helpers_1.10.4+repack-2 hostname_3.21 init-system-helpers_1.56+nmu1 intltool-debian_0.35.0+20060710.4 libacl1_2.2.52-3+b1 libaec-dev_1.0.2-1 libaec0_1.0.2-1 libapt-pkg5.0_1.8.0~alpha3 libarchive-zip-perl_1.64-1 libarchive13_3.3.3-2 libasan5_8.2.0-13 libatomic1_8.2.0-13 libattr1_1:2.4.47-2+b2 libaudit-common_1:2.8.4-2 libaudit1_1:2.8.4-2 libbinutils_2.31.1-11 libblkid1_2.33-0.2 libboost-dev_1.67.0.1 libboost1.67-dev_1.67.0-11 libbsd0_0.9.1-1 libbz2-1.0_1.0.6-9 libc-bin_2.28-3 libc-dev-bin_2.28-3 libc6_2.28-3 libc6-dev_2.28-3 libcairo2_1.16.0-2 libcap-ng0_0.7.9-1+b1 libcc1-0_8.2.0-13 libcdt5_2.40.1-5+b2 libcgraph6_2.40.1-5+b2 libclang1-6.0_1:6.0.1-9.2 libcom-err2_1.44.5-1 libcppunit-1.14-0_1.14.0-3 libcppunit-dev_1.14.0-3 libcroco3_0.6.12-2 libcurl4_7.62.0-1 libdatrie1_0.2.12-1 libdb5.3_5.3.28+dfsg1-0.2 libdebconfclient0_0.246 libdpkg-perl_1.19.2 libedit2_3.1-20181209-1 libelf1_0.175-1 libexpat1_2.2.6-1 libext2fs2_1.44.5-1 libfakeroot_1.23-1 libfdisk1_2.33-0.2 libffi6_3.2.1-9 libfile-stripnondeterminism-perl_1.0.0-1 libfontconfig1_2.13.1-2 libfreetype6_2.9.1-3 libfribidi0_1.0.5-3 libgcc-8-dev_8.2.0-13 libgcc1_1:8.2.0-13 libgcrypt20_1.8.4-4 libgd3_2.2.5-5 libgdbm-compat4_1.18.1-2 libgdbm5_1.14.1-6+b1 libgdbm6_1.18.1-2 libgfortran5_8.2.0-13 libglib2.0-0_2.58.1-2 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.5-2 libgomp1_8.2.0-13 libgpg-error-l10n_1.33-3 libgpg-error0_1.33-3 libgraphite2-3_1.3.12-1 libgssapi-krb5-2_1.16.1-1 libgts-0.7-5_0.7.6+darcs121130-4 libgvc6_2.40.1-5+b2 libgvpr2_2.40.1-5+b2 libharfbuzz0b_2.3.0-1 libhdf5-103_1.10.4+repack-2 libhdf5-cpp-103_1.10.4+repack-2 libhdf5-dev_1.10.4+repack-2 libhogweed4_3.4.1~rc1-1 libice6_2:1.0.9-2 libicu63_63.1-5 libidn2-0_2.0.5-1 libisl19_0.20-2 libjbig0_2.1-3.1+b2 libjpeg-dev_1:1.5.2-2 libjpeg62-turbo_1:1.5.2-2+b1 libjpeg62-turbo-dev_1:1.5.2-2+b1 libjsoncpp-dev_1.7.4-3 libjsoncpp1_1.7.4-3 libk5crypto3_1.16.1-1 libkeyutils1_1.5.9-9.3 libkrb5-3_1.16.1-1 libkrb5support0_1.16.1-1 liblab-gamut1_2.40.1-5+b2 libldap-2.4-2_2.4.47+dfsg-1 libldap-common_2.4.47+dfsg-1 libllvm6.0_1:6.0.1-9.2 libltdl7_2.4.6-6 liblz4-1_1.8.2-1 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.34-2 libmagic1_1:5.34-2 libmount1_2.33-0.2 libmpc3_1.1.0-1 libmpfr6_4.0.1-2 libncurses6_6.1+20181013-1 libncursesw6_6.1+20181013-1 libnettle6_3.4.1~rc1-1 libnghttp2-14_1.35.1-1 libp11-kit0_0.23.14-2 libpam-modules_1.1.8-3.8 libpam-modules-bin_1.1.8-3.8 libpam-runtime_1.1.8-3.8 libpam0g_1.1.8-3.8 libpango-1.0-0_1.42.4-5 libpangocairo-1.0-0_1.42.4-5 libpangoft2-1.0-0_1.42.4-5 libpathplan4_2.40.1-5+b2 libpcre3_2:8.39-11 libperl5.26_5.26.2-7+b1 libperl5.28_5.28.1-3 libpipeline1_1.5.0-2 libpixman-1-0_0.36.0-1 libpng16-16_1.6.34-2 libprocps7_2:3.3.15-2 libpsl5_0.20.2-2 librhash0_1.3.6-3 librtmp1_2.4+20151223.gitfa8646d.1-2 libsasl2-2_2.1.27~rc8-1 libsasl2-modules-db_2.1.27~rc8-1 libseccomp2_2.3.3-3 libselinux1_2.8-1+b1 libsemanage-common_2.8-1 libsemanage1_2.8-1+b1 libsepol1_2.8-1 libsigsegv2_2.12-2 libsm6_2:1.2.2-1+b3 libsmartcols1_2.33-0.2 libss2_1.44.5-1 libssh2-1_1.8.0-2 libssl1.1_1.1.1a-1 libstdc++-8-dev_8.2.0-13 libstdc++6_8.2.0-13 libsystemd0_239-15 libsz2_1.0.2-1 libtasn1-6_4.13-3 libthai-data_0.1.28-1 libthai0_0.1.28-1 libtiff5_4.0.10-3 libtinfo6_6.1+20181013-1 libtool_2.4.6-6 libubsan1_8.2.0-13 libuchardet0_0.0.6-3 libudev1_239-15 libunistring2_0.9.10-1 libuuid1_2.33-0.2 libuv1_1.24.0-1 libwebp6_0.6.1-2 libx11-6_2:1.6.7-1 libx11-data_2:1.6.7-1 libxapian30_1.4.9-1 libxau6_1:1.0.8-1+b2 libxaw7_2:1.0.13-1+b2 libxcb-render0_1.13.1-2 libxcb-shm0_1.13.1-2 libxcb1_1.13.1-2 libxdmcp6_1:1.1.2-3 libxdot4_2.40.1-5+b2 libxext6_2:1.3.3-1+b2 libxml2_2.9.4+dfsg1-7+b3 libxmu6_2:1.1.2-2 libxpm4_1:3.5.12-1 libxrender1_1:0.9.10-1 libxt6_1:1.1.5-1 libzstd1_1.3.5+dfsg-1 linux-libc-dev_4.19.12-1 login_1:4.5-1.1 lsb-base_10.2018112800 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.4-3 mawk_1.3.3-17+b3 mount_2.33-0.2 ncurses-base_6.1+20181013-1 ncurses-bin_6.1+20181013-1 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-3 perl-base_5.28.1-3 perl-modules-5.26_5.26.2-7 perl-modules-5.28_5.28.1-3 po-debconf_1.0.21 procps_2:3.3.15-2 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.93-1 tar_1.30+dfsg-3 tzdata_2018g-1 ucf_3.0038+nmu1 util-linux_2.33-0.2 x11-common_1:7.7+19 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: gatb-core Binary: gatb-core, libgatbcore0, libgatbcore-dev, gatb-core-testdata Architecture: any all Version: 1.4.1+dfsg-3 Maintainer: Debian Med Packaging Team Uploaders: Nadiya Sitdykova , Andreas Tille Homepage: https://github.com/GATB/gatb-core Standards-Version: 4.2.1 Vcs-Browser: https://salsa.debian.org/med-team/gatb-core Vcs-Git: https://salsa.debian.org/med-team/gatb-core.git Build-Depends: debhelper (>= 11~), d-shlibs, cmake, libcppunit-dev, libhdf5-dev, libboost-dev, libjsoncpp-dev, doxygen, graphviz Package-List: gatb-core deb science optional arch=any gatb-core-testdata deb science optional arch=all libgatbcore-dev deb libdevel optional arch=any libgatbcore0 deb libs optional arch=any Checksums-Sha1: 6b368683411cce9639189ad28340bba1303d38ab 2938536 gatb-core_1.4.1+dfsg.orig.tar.xz 4fa108c8c513757fa44a375e9408a3ebc40f16dc 19388 gatb-core_1.4.1+dfsg-3.debian.tar.xz Checksums-Sha256: 40ef74dcacf9a4bb0f55b06cd8cf41ac37cc6e45743880a4255047cbf2e64be2 2938536 gatb-core_1.4.1+dfsg.orig.tar.xz e2b01b92110407ac8fdcf931aeab7e16b74df8a19404ef0e01d9793d99fc5a89 19388 gatb-core_1.4.1+dfsg-3.debian.tar.xz Files: ba24d3c3806f6daa4df17260069a61f2 2938536 gatb-core_1.4.1+dfsg.orig.tar.xz 6f8d837f16a9b9fa36c07785d415bcb4 19388 gatb-core_1.4.1+dfsg-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAlwU264RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtECOg/9GsiA5ZR6UT/wWA+5x/pqDAnUXRFofKjI TREfZznSOI0fSlMkWTRYobiwgrBznPKLSlHSe60oghyoq/o0rUAK2CnBU1heNC1X 633Kyys64u0XIB1q8ET6h9HbvmnD6aIDC5+gg++6chlgRJ0nPGBjQmTa7jWxPr6+ 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gatb-core in /<> dpkg-source: info: unpacking gatb-core_1.4.1+dfsg.orig.tar.xz dpkg-source: info: unpacking gatb-core_1.4.1+dfsg-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_debian_packaged_hdf5.patch dpkg-source: info: applying fix_hdf5_includes.patch dpkg-source: info: applying dynamic_lib.patch dpkg-source: info: applying fix_install_location.patch dpkg-source: info: applying set_soversion.patch dpkg-source: info: applying dynamic_linking_of_tools.patch dpkg-source: info: applying multiarch.patch dpkg-source: info: applying spelling.patch Check disk space ---------------- Sufficient free space for build +------------------------------------------------------------------------------+ | Starting Timed Build Commands | +------------------------------------------------------------------------------+ ulimit -c --------- 10000000000 I: Finished running 'ulimit -c'. Finished processing commands. -------------------------------------------------------------------------------- User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANG=en_GB.UTF-8 LC_ALL=POSIX LC_COLLATE=C LC_CTYPE=en_GB.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PWD=/<> SCHROOT_ALIAS_NAME=sid-armhf-sbuild SCHROOT_CHROOT_NAME=sid-armhf-sbuild SCHROOT_COMMAND=env SCHROOT_GID=112 SCHROOT_GROUP=sbuild SCHROOT_SESSION_ID=sid-armhf-sbuild-71832b57-4e9c-4bc5-b4d3-76a953d87a71 SCHROOT_UID=108 SCHROOT_USER=sbuild SHELL=/bin/sh USER=sbuild dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package gatb-core dpkg-buildpackage: info: source version 1.4.1+dfsg-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean --sourcedirectory=gatb-core dh_auto_clean -O--sourcedirectory=gatb-core dh_autoreconf_clean -O--sourcedirectory=gatb-core dh_clean -O--sourcedirectory=gatb-core debian/rules build dh build --sourcedirectory=gatb-core dh_update_autotools_config -O--sourcedirectory=gatb-core dh_autoreconf -O--sourcedirectory=gatb-core dh_auto_configure -O--sourcedirectory=gatb-core cd obj-arm-linux-gnueabihf && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf ../gatb-core -- The C compiler identification is GNU 8.2.0 -- The CXX compiler identification is GNU 8.2.0 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- CppUnit: found headers (in /usr/include) but not the static library (/usr/include/../lib/libcppunit.a) -- CppUnit FOUND (/usr/include) -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of __uint128 -- Check size of __uint128 - failed -- Check size of __uint128_t -- Check size of __uint128_t - failed -- Options: -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so;/usr/lib/arm-linux-gnueabihf/libpthread.so;/usr/lib/arm-linux-gnueabihf/libsz.so;/usr/lib/arm-linux-gnueabihf/libz.so;/usr/lib/arm-linux-gnueabihf/libdl.so;/usr/lib/arm-linux-gnueabihf/libm.so (found version "1.10.4") -- HDF5_LIBRARIES="/usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so/usr/lib/arm-linux-gnueabihf/libpthread.so/usr/lib/arm-linux-gnueabihf/libsz.so/usr/lib/arm-linux-gnueabihf/libz.so/usr/lib/arm-linux-gnueabihf/libdl.so/usr/lib/arm-linux-gnueabihf/libm.so" -- OPTIMIZED KMER SIZES INTERVALS ARE 32 64 96 128 <-- max supported kmer size without recompilation CMake Warning (dev) at CMakeLists.txt:238 (set): Cannot set "gatb-core-klist": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. -- ---------- GATB TESTS ---------- -- ---------- GATB TOOLS ---------- DYNAMIC BINARIES for dbgh5 DYNAMIC BINARIES for dbginfo DYNAMIC BINARIES for leon -- Found HDF5: /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so;/usr/lib/arm-linux-gnueabihf/libpthread.so;/usr/lib/arm-linux-gnueabihf/libsz.so;/usr/lib/arm-linux-gnueabihf/libz.so;/usr/lib/arm-linux-gnueabihf/libdl.so;/usr/lib/arm-linux-gnueabihf/libm.so (found version "1.10.4") found components: C CMake Warning (dev) at CMakeLists.txt:265 (set): Cannot set "gatb-core-flags": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:266 (set): Cannot set "gatb-core-includes": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:267 (set): Cannot set "gatb-core-libraries": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:268 (set): Cannot set "gatb-core-cmake": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. -- Found Doxygen: /usr/bin/doxygen (found version "1.8.13") found components: doxygen dot -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY -- Build files have been written to: /<>/obj-arm-linux-gnueabihf debian/rules override_dh_auto_build-arch make[1]: Entering directory '/<>' dh_auto_build -a cd obj-arm-linux-gnueabihf && make -j8 "INSTALL=install --strip-program=true" make[2]: Entering directory '/<>/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/<>/gatb-core -B/<>/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-arm-linux-gnueabihf/CMakeFiles /<>/obj-arm-linux-gnueabihf/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' make -f src/CMakeFiles/gatbcore-dynamic.dir/build.make src/CMakeFiles/gatbcore-dynamic.dir/depend make -f src/CMakeFiles/gatbcore-static.dir/build.make src/CMakeFiles/gatbcore-static.dir/depend make -f thirdparty/CMakeFiles/thirdparty_copy.dir/build.make thirdparty/CMakeFiles/thirdparty_copy.dir/depend make[4]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core /<>/gatb-core/thirdparty /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/thirdparty /<>/obj-arm-linux-gnueabihf/thirdparty/CMakeFiles/thirdparty_copy.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core /<>/gatb-core/src /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/src /<>/obj-arm-linux-gnueabihf/src/CMakeFiles/gatbcore-dynamic.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core /<>/gatb-core/src /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/src /<>/obj-arm-linux-gnueabihf/src/CMakeFiles/gatbcore-static.dir/DependInfo.cmake --color= Scanning dependencies of target thirdparty_copy make[4]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f thirdparty/CMakeFiles/thirdparty_copy.dir/build.make thirdparty/CMakeFiles/thirdparty_copy.dir/build make[4]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf/thirdparty && /usr/bin/cmake -E make_directory /<>/obj-arm-linux-gnueabihf/include/None/json cd /<>/obj-arm-linux-gnueabihf/thirdparty && /usr/bin/cmake -E make_directory /<>/obj-arm-linux-gnueabihf/include/None/BooPHF cd /<>/obj-arm-linux-gnueabihf/thirdparty && /usr/bin/cmake -E copy_if_different /<>/gatb-core/thirdparty/BooPHF/BooPHF.h /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/ cd /<>/obj-arm-linux-gnueabihf/thirdparty && /usr/bin/cmake -E copy_if_different /<>/gatb-core/thirdparty/json/json.hpp /<>/obj-arm-linux-gnueabihf/include/None/json/ make[4]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 0%] Built target thirdparty_copy Scanning dependencies of target gatbcore-dynamic Scanning dependencies of target gatbcore-static make[4]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f src/CMakeFiles/gatbcore-dynamic.dir/build.make src/CMakeFiles/gatbcore-dynamic.dir/build make[4]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f src/CMakeFiles/gatbcore-static.dir/build.make src/CMakeFiles/gatbcore-static.dir/build make[4]: Entering directory '/<>/obj-arm-linux-gnueabihf' make[4]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 2%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/Bank.cpp.o [ 2%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/Bank.cpp.o [ 3%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankAlbum.cpp.o [ 2%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankBinary.cpp.o [ 2%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankFasta.cpp.o [ 2%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankBinary.cpp.o [ 3%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankAlbum.cpp.o [ 3%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/Bank.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/Bank.cpp cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankAlbum.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankAlbum.cpp cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/Bank.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/Bank.cpp cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankAlbum.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankAlbum.cpp cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankBinary.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankBinary.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankConverterAlgorithm.cpp cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankFasta.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankFasta.cpp /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp: In function 'bool gatb::core::bank::impl::checkMagic(FILE*)': /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp:54:11: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread (&value, sizeof(value), 1, file); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp: In member function 'virtual void gatb::core::bank::impl::BankBinary::Iterator::next()': /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp:453:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread (_bufferData->getBuffer(), sizeof( char),block_size, binary_read_file); // read a block of reads into the buffer ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp: In function 'bool gatb::core::bank::impl::checkMagic(FILE*)': /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp:54:11: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread (&value, sizeof(value), 1, file); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp: In member function 'virtual void gatb::core::bank::impl::BankBinary::Iterator::next()': /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp:453:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread (_bufferData->getBuffer(), sizeof( char),block_size, binary_read_file); // read a block of reads into the buffer ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/src/gatb/bank/impl/Bank.cpp:23: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/src/gatb/bank/impl/Bank.cpp:23: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 4%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankConverterAlgorithm.cpp [ 4%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankHelpers.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankHelpers.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankHelpers.cpp [ 5%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankRandom.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankRandom.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankRandom.cpp [ 5%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankFasta.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankFasta.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankFasta.cpp [ 5%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankSplitter.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankSplitter.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankSplitter.cpp [ 5%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bglue_algo.cpp.o [ 6%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bcalm_algo.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bglue_algo.cpp.o -c /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bcalm_algo.cpp.o -c /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp [ 7%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankHelpers.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankHelpers.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankHelpers.cpp [ 7%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankRandom.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankRandom.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankRandom.cpp [ 7%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankSplitter.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankSplitter.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankSplitter.cpp In file included from /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 7%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/logging.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/logging.cpp.o -c /<>/gatb-core/src/gatb/bcalm2/logging.cpp [ 8%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bcalm_algo.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bcalm_algo.cpp.o -c /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp [ 9%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/ograph.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/ograph.cpp.o -c /<>/gatb-core/src/gatb/bcalm2/ograph.cpp [ 9%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bglue_algo.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bglue_algo.cpp.o -c /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp [ 10%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/logging.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/logging.cpp.o -c /<>/gatb-core/src/gatb/bcalm2/logging.cpp /<>/gatb-core/src/gatb/bcalm2/logging.cpp: In function 'long unsigned int gatb::core::debruijn::impl::logging(std::__cxx11::string)': /<>/gatb-core/src/gatb/bcalm2/logging.cpp:31:33: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'u_int64_t' {aka 'long long unsigned int'} [-Wformat=] snprintf (tmp, sizeof(tmp), " memory [current, maxRSS]: [%4lu, %4lu] MB ", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem, memMaxProcess); ~~~ /<>/gatb-core/src/gatb/bcalm2/logging.cpp:31:33: warning: format '%lu' expects argument of type 'long unsigned int', but argument 5 has type 'u_int64_t' {aka 'long long unsigned int'} [-Wformat=] [ 10%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp [ 11%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Frontline.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Frontline.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Frontline.cpp [ 11%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/ograph.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/ograph.cpp.o -c /<>/gatb-core/src/gatb/bcalm2/ograph.cpp [ 11%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Graph.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Graph.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp /<>/gatb-core/src/gatb/bcalm2/logging.cpp: In function 'long unsigned int gatb::core::debruijn::impl::logging(std::__cxx11::string)': /<>/gatb-core/src/gatb/bcalm2/logging.cpp:31:33: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'u_int64_t' {aka 'long long unsigned int'} [-Wformat=] snprintf (tmp, sizeof(tmp), " memory [current, maxRSS]: [%4lu, %4lu] MB ", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem, memMaxProcess); ~~~ /<>/gatb-core/src/gatb/bcalm2/logging.cpp:31:33: warning: format '%lu' expects argument of type 'long unsigned int', but argument 5 has type 'u_int64_t' {aka 'long long unsigned int'} [-Wformat=] [ 11%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp /<>/gatb-core/src/gatb/bcalm2/ograph.cpp: In member function 'void gatb::core::debruijn::impl::graph3::addtuple(std::tuple, std::allocator >, unsigned int, unsigned int, unsigned int>&)': /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:372:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation] else ^~~~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:374:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' if(minimizer==get<2>(tuple)){ ^~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:389:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation] else ^~~~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:391:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' ++indiceUnitigs; ^~ In file included from /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 11%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp: In member function 'void gatb::core::debruijn::impl::graph3::addtuple(std::tuple, std::allocator >, unsigned int, unsigned int, unsigned int>&)': /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:372:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation] else ^~~~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:374:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' if(minimizer==get<2>(tuple)){ ^~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:389:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation] else ^~~~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:391:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' ++indiceUnitigs; ^~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 12%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Frontline.cpp [ 12%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Graph.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Graph.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 13%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp [ 13%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.cpp [ 13%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/LinkTigs.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/LinkTigs.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/LinkTigs.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.hpp:27, from /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:20: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>'} changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.hpp:27, from /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:20: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 14%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.cpp:20: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 15%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp [ 15%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Terminator.cpp [ 15%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/LinkTigs.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/LinkTigs.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/LinkTigs.cpp In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ [ 16%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Simplifications.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Simplifications.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.cpp:20: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>'} changed in GCC 7.1 [ 17%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 17%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Terminator.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Terminator.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Terminator.cpp [ 17%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type' {aka 'unsigned int'} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 18%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ [ 18%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Traversal.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Traversal.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Iterator2 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21: /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Iterator2 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:61, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 19%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp [ 19%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomBuilder.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomBuilder.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/BloomBuilder.cpp [ 19%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Configuration.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Configuration.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/Configuration.cpp /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type' {aka 'unsigned int'} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 20%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/ConfigurationAlgorithm.cpp [ 20%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp [ 21%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomBuilder.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomBuilder.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/BloomBuilder.cpp [ 21%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Configuration.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Configuration.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/Configuration.cpp [ 22%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o [ 22%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/ConfigurationAlgorithm.cpp cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/DebloomAlgorithm.cpp [ 22%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/DebloomAlgorithm.cpp In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21: /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ [ 22%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp [ 23%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/LinearCounter.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/LinearCounter.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/LinearCounter.cpp [ 23%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp [ 25%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Model.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Model.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/Model.cpp [ 26%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp [ 26%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/LinearCounter.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/LinearCounter.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/LinearCounter.cpp [ 26%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ModelData.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ModelData.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/ModelData.cpp [ 26%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp [ 26%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartiInfo.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartiInfo.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 27%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartitionsCommand.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartitionsCommand.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp [ 28%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Model.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Model.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/Model.cpp [ 28%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ModelData.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ModelData.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/ModelData.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ [ 29%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartiInfo.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartiInfo.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp [ 29%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartitionsCommand.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartitionsCommand.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp: In member function 'void gatb::core::kmer::impl::Repartitor::printInfo()': /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:308:12: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'size_t' {aka 'unsigned int'} [-Wformat=] printf("Repartitor : nbMinimizers=%ld\n", nbMinimizers); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:309:61: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'u_int64_t' {aka 'long long unsigned int'} [-Wformat=] for (u_int64_t ii=0; ii>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 [ 29%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/RepartitionAlgorithm.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Repartitor::itriple&}; _Tp = gatb::core::kmer::impl::Repartitor::itriple; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Repartitor::itriple}; _Tp = gatb::core::kmer::impl::Repartitor::itriple; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::kmer::impl::Repartitor::computeDistrib(const gatb::core::kmer::impl::PartiInfo<5>&)': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 30%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp [ 30%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemCommon.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemCommon.cpp.o -c /<>/gatb-core/src/gatb/system/impl/FileSystemCommon.cpp [ 30%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/RepartitionAlgorithm.cpp /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp: In member function 'void gatb::core::kmer::impl::Repartitor::printInfo()': /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:308:12: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'size_t' {aka 'unsigned int'} [-Wformat=] printf("Repartitor : nbMinimizers=%ld\n", nbMinimizers); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:309:61: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'u_int64_t' {aka 'long long unsigned int'} [-Wformat=] for (u_int64_t ii=0; ii>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 [ 31%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemLinux.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemLinux.cpp.o -c /<>/gatb-core/src/gatb/system/impl/FileSystemLinux.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Repartitor::itriple&}; _Tp = gatb::core::kmer::impl::Repartitor::itriple; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Repartitor::itriple}; _Tp = gatb::core::kmer::impl::Repartitor::itriple; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::kmer::impl::Repartitor::computeDistrib(const gatb::core::kmer::impl::PartiInfo<5>&)': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 31%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemMacos.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemMacos.cpp.o -c /<>/gatb-core/src/gatb/system/impl/FileSystemMacos.cpp [ 31%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/System.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/System.cpp.o -c /<>/gatb-core/src/gatb/system/impl/System.cpp In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 32%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/SystemInfoCommon.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/SystemInfoCommon.cpp.o -c /<>/gatb-core/src/gatb/system/impl/SystemInfoCommon.cpp [ 33%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp [ 33%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadLinux.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadLinux.cpp.o -c /<>/gatb-core/src/gatb/system/impl/ThreadLinux.cpp [ 34%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadMacos.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadMacos.cpp.o -c /<>/gatb-core/src/gatb/system/impl/ThreadMacos.cpp [ 34%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/collections/impl/Bloom.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/collections/impl/Bloom.cpp.o -c /<>/gatb-core/src/gatb/tools/collections/impl/Bloom.cpp [ 35%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/DnaCoder.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/DnaCoder.cpp.o -c /<>/gatb-core/src/gatb/tools/compression/DnaCoder.cpp [ 35%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/HeaderCoder.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/HeaderCoder.cpp.o -c /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp /<>/gatb-core/src/gatb/system/impl/ThreadLinux.cpp: In constructor 'gatb::core::system::impl::ThreadLinux::ThreadLinux(void* (*)(void*), void*)': /<>/gatb-core/src/gatb/system/impl/ThreadLinux.cpp:51:7: warning: variable 'ret' set but not used [-Wunused-but-set-variable] int ret = pthread_attr_init ( &tattr ) ; ^~~ [ 35%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/Leon.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/Leon.cpp.o -c /<>/gatb-core/src/gatb/tools/compression/Leon.cpp In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 [ 35%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemCommon.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemCommon.cpp.o -c /<>/gatb-core/src/gatb/system/impl/FileSystemCommon.cpp [ 35%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemLinux.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemLinux.cpp.o -c /<>/gatb-core/src/gatb/system/impl/FileSystemLinux.cpp [ 36%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemMacos.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemMacos.cpp.o -c /<>/gatb-core/src/gatb/system/impl/FileSystemMacos.cpp [ 36%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/System.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/System.cpp.o -c /<>/gatb-core/src/gatb/system/impl/System.cpp [ 37%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/SystemInfoCommon.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/SystemInfoCommon.cpp.o -c /<>/gatb-core/src/gatb/system/impl/SystemInfoCommon.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 37%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadLinux.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadLinux.cpp.o -c /<>/gatb-core/src/gatb/system/impl/ThreadLinux.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 [ 38%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadMacos.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadMacos.cpp.o -c /<>/gatb-core/src/gatb/system/impl/ThreadMacos.cpp /<>/gatb-core/src/gatb/system/impl/ThreadLinux.cpp: In constructor 'gatb::core::system::impl::ThreadLinux::ThreadLinux(void* (*)(void*), void*)': /<>/gatb-core/src/gatb/system/impl/ThreadLinux.cpp:51:7: warning: variable 'ret' set but not used [-Wunused-but-set-variable] int ret = pthread_attr_init ( &tattr ) ; ^~~ [ 38%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/collections/impl/Bloom.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/collections/impl/Bloom.cpp.o -c /<>/gatb-core/src/gatb/tools/collections/impl/Bloom.cpp [ 39%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/RangeCoder.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/RangeCoder.cpp.o -c /<>/gatb-core/src/gatb/tools/compression/RangeCoder.cpp In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ [ 39%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/DnaCoder.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/DnaCoder.cpp.o -c /<>/gatb-core/src/gatb/tools/compression/DnaCoder.cpp In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ [ 40%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/HeaderCoder.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/HeaderCoder.cpp.o -c /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/gatb_core.hpp:71, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt64'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core/src/gatb/tools/collections/impl/Bloom.hpp:33, from /<>/gatb-core/src/gatb/gatb_core.hpp:40, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: 'class gatb::core::tools::math::NativeInt64' declared here class NativeInt64 ^~~~~~~~~~~ [ 40%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/Leon.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/Leon.cpp.o -c /<>/gatb-core/src/gatb/tools/compression/Leon.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:27, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core/src/gatb/tools/compression/Leon.hpp: In member function 'kmer_type DnaDecoder::extendAnchor(kmer_type, int, bool)': /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of 'const int [5]' [-Warray-bounds] return bin2ntTab[nt]; ~~~~~~~~~~~~^ /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of 'const int [5]' [-Warray-bounds] return bin2ntTab[nt]; ~~~~~~~~~~~~^ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/8/bits/stl_vector.h: In member function 'void DnaEncoder::buildKmers()': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/gatb_core.hpp:71, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt64'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core/src/gatb/tools/collections/impl/Bloom.hpp:33, from /<>/gatb-core/src/gatb/gatb_core.hpp:40, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: 'class gatb::core::tools::math::NativeInt64' declared here class NativeInt64 ^~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ [ 40%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Command.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Command.cpp.o -c /<>/gatb-core/src/gatb/tools/designpattern/impl/Command.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:27, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core/src/gatb/tools/compression/Leon.hpp: In member function 'kmer_type DnaDecoder::extendAnchor(kmer_type, int, bool)': /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of 'const int [5]' [-Warray-bounds] return bin2ntTab[nt]; ~~~~~~~~~~~~^ /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of 'const int [5]' [-Warray-bounds] return bin2ntTab[nt]; ~~~~~~~~~~~~^ /usr/include/c++/8/bits/vector.tcc: In function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 41%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/RangeCoder.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/RangeCoder.cpp.o -c /<>/gatb-core/src/gatb/tools/compression/RangeCoder.cpp /<>/gatb-core/src/gatb/tools/compression/Leon.hpp: In member function 'void DnaDecoder::decodeAnchorRead()': /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of 'const int [5]' [-Warray-bounds] return bin2ntTab[nt]; ~~~~~~~~~~~~^ /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of 'const int [5]' [-Warray-bounds] return bin2ntTab[nt]; ~~~~~~~~~~~~^ /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of 'const int [5]' [-Warray-bounds] return bin2ntTab[nt]; ~~~~~~~~~~~~^ /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of 'const int [5]' [-Warray-bounds] return bin2ntTab[nt]; ~~~~~~~~~~~~^ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 [ 42%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Observer.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Observer.cpp.o -c /<>/gatb-core/src/gatb/tools/designpattern/impl/Observer.cpp In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ [ 42%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Command.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Command.cpp.o -c /<>/gatb-core/src/gatb/tools/designpattern/impl/Command.cpp [ 42%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Algorithm.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Algorithm.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.cpp In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/8/bits/stl_vector.h: In member function 'void DnaEncoder::buildKmers()': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 42%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Observer.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Observer.cpp.o -c /<>/gatb-core/src/gatb/tools/designpattern/impl/Observer.cpp [ 43%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Algorithm.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Algorithm.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.cpp [ 43%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Histogram.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Histogram.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp [ 44%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/OptionsParser.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/OptionsParser.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/OptionsParser.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ [ 44%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Progress.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Progress.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Progress.cpp /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /<>/gatb-core/src/gatb/tools/misc/impl/Progress.cpp: In member function 'virtual void gatb::core::tools::misc::impl::ProgressTimerAndSystem::fillBuffer(double)': /<>/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:33: warning: format '%lu' expects argument of type 'long unsigned int', but argument 5 has type 'u_int64_t' {aka 'long long unsigned int'} [-Wformat=] snprintf (tmp, sizeof(tmp), " cpu: %5.1f %% mem: [%4lu, %4lu, %4lu] MB ", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:352:9: mem, _memMax, memMaxProcess ~~~ /<>/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:33: warning: format '%lu' expects argument of type 'long unsigned int', but argument 6 has type 'u_int64_t' {aka 'long long unsigned int'} [-Wformat=] /<>/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:33: warning: format '%lu' expects argument of type 'long unsigned int', but argument 7 has type 'u_int64_t' {aka 'long long unsigned int'} [-Wformat=] [ 44%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Property.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Property.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Property.cpp /<>/gatb-core/src/gatb/tools/misc/impl/Property.cpp: In member function 'virtual void gatb::core::tools::misc::impl::Properties::setInt(const string&, const int64_t&)': /<>/gatb-core/src/gatb/tools/misc/impl/Property.cpp:438:39: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'int64_t' {aka 'long long int'} [-Wformat=] snprintf (buffer, sizeof(buffer), "%ld", value); ^~~~~ ~~~~~ [ 44%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Histogram.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Histogram.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp [ 45%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/TimeInfo.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/TimeInfo.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/TimeInfo.cpp In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/misc/impl/Histogram.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp:20: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/misc/impl/Histogram.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp:20: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 45%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tokenizer.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tokenizer.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Tokenizer.cpp [ 46%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tool.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tool.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Tool.cpp [ 47%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/OptionsParser.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/OptionsParser.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/OptionsParser.cpp [ 47%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/XmlReader.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/XmlReader.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/XmlReader.cpp In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/misc/impl/Histogram.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp:20: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/misc/impl/Histogram.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp:20: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 47%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/Storage.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/Storage.cpp.o -c /<>/gatb-core/src/gatb/tools/storage/impl/Storage.cpp In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/8/bits/stl_vector.h: In member function 'void Leon::decodeAnchorDict()': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Progress.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Progress.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Progress.cpp /usr/include/c++/8/bits/stl_vector.h: In member function 'void Leon::startDecompression_setup()': /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ^~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ^~~~~~~~~~~~~~ [ 48%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/StorageTools.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/StorageTools.cpp.o -c /<>/gatb-core/src/gatb/tools/storage/impl/StorageTools.cpp In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /<>/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ [ 48%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp /<>/gatb-core/src/gatb/tools/misc/impl/Progress.cpp: In member function 'virtual void gatb::core::tools::misc::impl::ProgressTimerAndSystem::fillBuffer(double)': /<>/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:33: warning: format '%lu' expects argument of type 'long unsigned int', but argument 5 has type 'u_int64_t' {aka 'long long unsigned int'} [-Wformat=] snprintf (tmp, sizeof(tmp), " cpu: %5.1f %% mem: [%4lu, %4lu, %4lu] MB ", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:352:9: mem, _memMax, memMaxProcess ~~~ /<>/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:33: warning: format '%lu' expects argument of type 'long unsigned int', but argument 6 has type 'u_int64_t' {aka 'long long unsigned int'} [-Wformat=] /<>/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:33: warning: format '%lu' expects argument of type 'long unsigned int', but argument 7 has type 'u_int64_t' {aka 'long long unsigned int'} [-Wformat=] [ 50%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Property.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Property.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Property.cpp [ 51%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp /<>/gatb-core/src/gatb/tools/misc/impl/Property.cpp: In member function 'virtual void gatb::core::tools::misc::impl::Properties::setInt(const string&, const int64_t&)': /<>/gatb-core/src/gatb/tools/misc/impl/Property.cpp:438:39: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'int64_t' {aka 'long long int'} [-Wformat=] snprintf (buffer, sizeof(buffer), "%ld", value); ^~~~~ ~~~~~ In file included from /<>/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 128]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:13:17: required from here /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/8/bits/stl_vector.h: In member function 'void Leon::decodeAnchorDict()': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void Leon::startDecompression_setup()': /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ^~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ^~~~~~~~~~~~~~ [ 51%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/TimeInfo.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/TimeInfo.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/TimeInfo.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::tools::storage::impl::SuperKmerBinFiles::SuperKmerBinFiles(const string&, const string&, size_t)': /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ^~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 32]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:13:17: required from here /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ [ 51%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp [ 52%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_96.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_96.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp [ 52%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tokenizer.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tokenizer.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Tokenizer.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ [ 53%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tool.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tool.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Tool.cpp In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 128]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 128]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 53%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_128.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_128.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp In file included from /<>/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 64]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:13:17: required from here /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ [ 53%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/XmlReader.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/XmlReader.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/XmlReader.cpp [ 53%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_32.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_32.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp In file included from /<>/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 96]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:13:17: required from here /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 32]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 32]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 54%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp [ 54%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp In file included from /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:3: /<>/gatb-core/src/gatb/bcalm2/ograph.cpp: In member function 'void gatb::core::debruijn::impl::graph3::addtuple(std::tuple, std::allocator >, unsigned int, unsigned int, unsigned int>&)': /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:372:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation] else ^~~~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:374:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' if(minimizer==get<2>(tuple)){ ^~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:389:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation] else ^~~~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:391:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' ++indiceUnitigs; ^~ In file included from /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 55%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/Storage.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/Storage.cpp.o -c /<>/gatb-core/src/gatb/tools/storage/impl/Storage.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 64]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 64]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:3: /<>/gatb-core/src/gatb/bcalm2/ograph.cpp: In member function 'void gatb::core::debruijn::impl::graph3::addtuple(std::tuple, std::allocator >, unsigned int, unsigned int, unsigned int>&)': /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:372:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation] else ^~~~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:374:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' if(minimizer==get<2>(tuple)){ ^~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:389:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation] else ^~~~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:391:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' ++indiceUnitigs; ^~ In file included from /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of 'uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]': /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:747:60: required from 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, bool) [with unsigned int SPAN = 128; std::__cxx11::string = std::__cxx11::basic_string]' /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:28:9: required from here /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] [ 56%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp In file included from /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of 'uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]': /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:747:60: required from 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, bool) [with unsigned int SPAN = 32; std::__cxx11::string = std::__cxx11::basic_string]' /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:28:9: required from here /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:3: /<>/gatb-core/src/gatb/bcalm2/ograph.cpp: In member function 'void gatb::core::debruijn::impl::graph3::addtuple(std::tuple, std::allocator >, unsigned int, unsigned int, unsigned int>&)': /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:372:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation] else ^~~~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:374:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' if(minimizer==get<2>(tuple)){ ^~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:389:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation] else ^~~~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:391:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' ++indiceUnitigs; ^~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 96]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 96]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of 'uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]': /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:747:60: required from 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, bool) [with unsigned int SPAN = 64; std::__cxx11::string = std::__cxx11::basic_string]' /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:28:9: required from here /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /<>/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<32>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<32>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<32>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<32>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:3: /<>/gatb-core/src/gatb/bcalm2/ograph.cpp: In member function 'void gatb::core::debruijn::impl::graph3::addtuple(std::tuple, std::allocator >, unsigned int, unsigned int, unsigned int>&)': /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:372:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation] else ^~~~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:374:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' if(minimizer==get<2>(tuple)){ ^~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:389:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation] else ^~~~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:391:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' ++indiceUnitigs; ^~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:6: /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 128]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:14:16: required from here /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 128]': /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 128]' /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:14:16: required from here /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] while(filenames.size() > _reduceTarget) ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of 'uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]': /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:747:60: required from 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, bool) [with unsigned int SPAN = 96; std::__cxx11::string = std::__cxx11::basic_string]' /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:28:9: required from here /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] [ 56%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp In file included from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 128]': /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:956:5: required from 'void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 128; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<128>::SuperKmer]' /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:947:8: required from here /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt64'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: 'class gatb::core::tools::math::NativeInt64' declared here class NativeInt64 ^~~~~~~~~~~ [ 56%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::tools::storage::impl::SuperKmerBinFiles::SuperKmerBinFiles(const string&, const string&, size_t)': /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ^~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:6: /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 32]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:14:16: required from here /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 32]': /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 32]' /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:14:16: required from here /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] while(filenames.size() > _reduceTarget) ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:6: /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 64]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:14:16: required from here /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 32]': /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:956:5: required from 'void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 32; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<>::SuperKmer]' /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:947:8: required from here /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 64]': /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 64]' /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:14:16: required from here /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] while(filenames.size() > _reduceTarget) ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt64'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: 'class gatb::core::tools::math::NativeInt64' declared here class NativeInt64 ^~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 64]': /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:956:5: required from 'void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 64; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<64>::SuperKmer]' /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:947:8: required from here /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt64'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: 'class gatb::core::tools::math::NativeInt64' declared here class NativeInt64 ^~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 56%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/StorageTools.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/StorageTools.cpp.o -c /<>/gatb-core/src/gatb/tools/storage/impl/StorageTools.cpp /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<32>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<32>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<32>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<32>::KmerCanonical; unsigned int span = 32]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<32>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<32>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 128]::ptcfcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t)::UniquifyKeys::operator()(const gatb::core::bank::Sequence&) [with int SPAN = 128]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 56%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >'} changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<96>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<96>::KmerCanonical; unsigned int span = 96]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<32>&}; _Tp = gatb::core::debruijn::impl::markedSeq<32>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<128>&}; _Tp = gatb::core::debruijn::impl::markedSeq<128>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<64>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<64>::KmerCanonical; unsigned int span = 64]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t)::UniquifyKeys::operator()(const gatb::core::bank::Sequence&) [with int SPAN = 64]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<64>&}; _Tp = gatb::core::debruijn::impl::markedSeq<64>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator' {aka '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator' {aka '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t)::UniquifyKeys::operator()(const gatb::core::bank::Sequence&) [with int SPAN = 96]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 128]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:13:17: required from here /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<32>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<128>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<32>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<128>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool)::InsertTravellerKmer::operator()(const gatb::core::bank::Sequence&) [with unsigned int SPAN = 128]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 64]::ptcfcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/char_traits.h:39, from /usr/include/c++/8/string:40, from /<>/gatb-core/src/gatb/tools/storage/api/ICell.hpp:32, from /<>/gatb-core/src/gatb/tools/storage/impl/Cell.hpp:29, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:37, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algobase.h: In function 'void std::iter_swap(_ForwardIterator1, _ForwardIterator2) [with _ForwardIterator1 = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _ForwardIterator2 = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >]': /usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 iter_swap(_ForwardIterator1 __a, _ForwardIterator2 __b) ^~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:84:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::iter_swap(__result, __b); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:86:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::iter_swap(__result, __c); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:88:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::iter_swap(__result, __a); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator' {aka '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<96>&}; _Tp = gatb::core::debruijn::impl::markedSeq<96>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 32]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<64>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<64>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 128]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator' {aka '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 64]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<96>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, bool) [with unsigned int SPAN = 32]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<96>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool)::InsertTravellerKmer::operator()(const gatb::core::bank::Sequence&) [with unsigned int SPAN = 96]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, bool) [with unsigned int SPAN = 128]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 } ^ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 128]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 128]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, bool) [with unsigned int SPAN = 64]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::priority_queue<_Tp, _Sequence, _Compare>::push(std::priority_queue<_Tp, _Sequence, _Compare>::value_type&&) [with _Tp = std::pair >; _Sequence = std::vector >, std::allocator > > >; _Compare = gatb::core::kmer::impl::TempCountFileMerger<128>::ptcfcomp]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 } ^ /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::priority_queue<_Tp, _Sequence, _Compare>::push(std::priority_queue<_Tp, _Sequence, _Compare>::value_type&&) [with _Tp = std::pair >; _Sequence = std::vector >, std::allocator > > >; _Compare = gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 128]::ptcfcomp]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 32]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 96]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 } ^ /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 128]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, bool) [with unsigned int SPAN = 96]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 64]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 } ^ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 32]::UniquifyKeys]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 57%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp In file included from /<>/gatb-core/src/gatb/tools/designpattern/impl/Command.hpp:30, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:14, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:331:9: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 } ^ /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:331:9: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::priority_queue<_Tp, _Sequence, _Compare>::push(std::priority_queue<_Tp, _Sequence, _Compare>::value_type&&) [with _Tp = std::pair >; _Sequence = std::vector >, std::allocator > > >; _Compare = gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 32]::ptcfcomp]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::priority_queue<_Tp, _Sequence, _Compare>::push(std::priority_queue<_Tp, _Sequence, _Compare>::value_type&&) [with _Tp = std::pair >; _Sequence = std::vector >, std::allocator > > >; _Compare = gatb::core::kmer::impl::TempCountFileMerger<32>::ptcfcomp]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 32]::InsertTravellerKmer]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::priority_queue<_Tp, _Sequence, _Compare>::push(std::priority_queue<_Tp, _Sequence, _Compare>::value_type&&) [with _Tp = std::pair >; _Sequence = std::vector >, std::allocator > > >; _Compare = gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 64]::ptcfcomp]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::priority_queue<_Tp, _Sequence, _Compare>::push(std::priority_queue<_Tp, _Sequence, _Compare>::value_type&&) [with _Tp = std::pair >; _Sequence = std::vector >, std::allocator > > >; _Compare = gatb::core::kmer::impl::TempCountFileMerger<64>::ptcfcomp]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<32>::Count; Functor = gatb::core::debruijn::impl::InsertIntoQueues<32>]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 96]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::InsertIntoQueues::operator()(gatb::core::debruijn::impl::InsertIntoQueues::Count&) [with int SPAN = 128]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 32]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 64]::InsertTravellerKmer]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::InsertIntoQueues::operator()(gatb::core::debruijn::impl::InsertIntoQueues::Count&) [with int SPAN = 64]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 128]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 32]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:13:17: required from here /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 64]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::InsertIntoQueues::operator()(gatb::core::debruijn::impl::InsertIntoQueues::Count&) [with int SPAN = 96]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 128]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::link_tigs(std::__cxx11::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 32]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 96]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, bool) [with unsigned int SPAN = 32]::': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::link_tigs(std::__cxx11::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 128]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::link_tigs(std::__cxx11::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 64]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, bool) [with unsigned int SPAN = 128]::': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, bool) [with unsigned int SPAN = 64]::': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 32]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 32]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 32]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 64]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::link_tigs(std::__cxx11::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 96]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, bool) [with unsigned int SPAN = 96]::': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 57%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp [ 58%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp [ 58%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp [ 59%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp In file included from /<>/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 64]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:13:17: required from here /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:6: /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 96]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:14:16: required from here /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 96]': /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 96]' /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:14:16: required from here /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] while(filenames.size() > _reduceTarget) ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ [ 59%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp In file included from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 96]': /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:956:5: required from 'void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 96; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<96>::SuperKmer]' /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:947:8: required from here /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt64'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: 'class gatb::core::tools::math::NativeInt64' declared here class NativeInt64 ^~~~~~~~~~~ [ 59%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 64]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 64]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 60%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp [ 60%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:6: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<4>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:6: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:6: /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of 'void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 128; Abundance_t = unsigned char; NodeState_t = unsigned char]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:13:16: required from here /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:310:21: warning: unused variable 'abundance' [-Wunused-variable] Abundance_t abundance = (*_abundanceMap)[count.value]; ^~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<1>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:6: /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of 'void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 32; Abundance_t = unsigned char; NodeState_t = unsigned char]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:13:16: required from here /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:310:21: warning: unused variable 'abundance' [-Wunused-variable] Abundance_t abundance = (*_abundanceMap)[count.value]; ^~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 61%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_96.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_96.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 32]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<2>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<3>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 96]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:13:17: required from here /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 96]::ptcfcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<4>&}; _Tp = gatb::core::tools::math::LargeInt<4>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<2>&}; _Tp = gatb::core::tools::math::LargeInt<2>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 62%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<3>&}; _Tp = gatb::core::tools::math::LargeInt<3>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<4>]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 96]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 128]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 96]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<1>]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_algo.h: In function 'bool std::binary_search(_FIter, _FIter, const _Tp&) [with _FIter = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<4>]': /usr/include/c++/8/bits/stl_algo.h:2247:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 binary_search(_ForwardIterator __first, _ForwardIterator __last, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:2247:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'bool std::binary_search(_FIter, _FIter, const _Tp&) [with _FIter = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<1>]': /usr/include/c++/8/bits/stl_algo.h:2247:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 binary_search(_ForwardIterator __first, _ForwardIterator __last, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:2247:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:6: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:6: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<2>]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:6: /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of 'void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 64; Abundance_t = unsigned char; NodeState_t = unsigned char]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:13:16: required from here /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:310:21: warning: unused variable 'abundance' [-Wunused-variable] Abundance_t abundance = (*_abundanceMap)[count.value]; ^~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 64]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:7: /<>/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<32>::Count; Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<32>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<32>::Count, gatb::core::tools::math::LargeInt<1> >]': /<>/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:6: /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of 'void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 96; Abundance_t = unsigned char; NodeState_t = unsigned char]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:13:16: required from here /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:310:21: warning: unused variable 'abundance' [-Wunused-variable] Abundance_t abundance = (*_abundanceMap)[count.value]; ^~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:7: /<>/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function 'void gatb::core::kmer::impl::Kmer::ModelAbstract::iterateIncomingNeighbors(const Type&, Functor&, const std::bitset<4>&) const [with Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<128>::Count, gatb::core::tools::math::LargeInt<4> >::FunctorNeighbors; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]': /<>/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function 'void gatb::core::kmer::impl::Kmer::ModelAbstract::iterateOutgoingNeighbors(const Type&, Functor&, const std::bitset<4>&) const [with Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<128>::Count, gatb::core::tools::math::LargeInt<4> >::FunctorNeighbors; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]': /<>/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<3>]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 96]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 32]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 128]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::priority_queue<_Tp, _Sequence, _Compare>::push(std::priority_queue<_Tp, _Sequence, _Compare>::value_type&&) [with _Tp = std::pair >; _Sequence = std::vector >, std::allocator > > >; _Compare = gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 96]::ptcfcomp]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::priority_queue<_Tp, _Sequence, _Compare>::push(std::priority_queue<_Tp, _Sequence, _Compare>::value_type&&) [with _Tp = std::pair >; _Sequence = std::vector >, std::allocator > > >; _Compare = gatb::core::kmer::impl::TempCountFileMerger<96>::ptcfcomp]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ [ 62%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_128.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_128.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp /usr/include/c++/8/bits/stl_algo.h: In function 'bool std::binary_search(_FIter, _FIter, const _Tp&) [with _FIter = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<3>]': /usr/include/c++/8/bits/stl_algo.h:2247:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 binary_search(_ForwardIterator __first, _ForwardIterator __last, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:2247:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 64]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:7: /<>/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function 'void gatb::core::kmer::impl::Kmer::ModelAbstract::iterateIncomingNeighbors(const Type&, Functor&, const std::bitset<4>&) const [with Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<96>::Count, gatb::core::tools::math::LargeInt<3> >::FunctorNeighbors; ModelImpl = gatb::core::kmer::impl::Kmer<96>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<96>::KmerCanonical; unsigned int span = 96]': /<>/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<96>::Count; Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<96>::Count, gatb::core::tools::math::LargeInt<3> >]': /<>/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 96]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:3: /<>/gatb-core/src/gatb/bcalm2/ograph.cpp: In member function 'void gatb::core::debruijn::impl::graph3::addtuple(std::tuple, std::allocator >, unsigned int, unsigned int, unsigned int>&)': /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:372:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation] else ^~~~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:374:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' if(minimizer==get<2>(tuple)){ ^~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:389:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation] else ^~~~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:391:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' ++indiceUnitigs; ^~ In file included from /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of 'uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]': /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:747:60: required from 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, bool) [with unsigned int SPAN = 128; std::__cxx11::string = std::__cxx11::basic_string]' /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:28:9: required from here /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] [ 62%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp [ 63%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_32.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_32.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp [ 64%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp [ 64%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ [ 64%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 96]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:3: /<>/gatb-core/src/gatb/bcalm2/ograph.cpp: In member function 'void gatb::core::debruijn::impl::graph3::addtuple(std::tuple, std::allocator >, unsigned int, unsigned int, unsigned int>&)': /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:372:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation] else ^~~~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:374:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' if(minimizer==get<2>(tuple)){ ^~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:389:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation] else ^~~~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:391:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' ++indiceUnitigs; ^~ [ 65%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp In file included from /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of 'uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]': /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:747:60: required from 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, bool) [with unsigned int SPAN = 32; std::__cxx11::string = std::__cxx11::basic_string]' /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:28:9: required from here /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] In file included from /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:3: /<>/gatb-core/src/gatb/bcalm2/ograph.cpp: In member function 'void gatb::core::debruijn::impl::graph3::addtuple(std::tuple, std::allocator >, unsigned int, unsigned int, unsigned int>&)': /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:372:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation] else ^~~~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:374:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' if(minimizer==get<2>(tuple)){ ^~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:389:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation] else ^~~~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:391:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' ++indiceUnitigs; ^~ In file included from /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of 'uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]': /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:747:60: required from 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, bool) [with unsigned int SPAN = 64; std::__cxx11::string = std::__cxx11::basic_string]' /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:28:9: required from here /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<32>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<32>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<32>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<32>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t)::UniquifyKeys::operator()(const gatb::core::bank::Sequence&) [with int SPAN = 128]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 65%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<128>&}; _Tp = gatb::core::debruijn::impl::markedSeq<128>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<32>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<32>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<32>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<32>::KmerCanonical; unsigned int span = 32]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<32>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<32>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator' {aka '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<128>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<128>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool)::InsertTravellerKmer::operator()(const gatb::core::bank::Sequence&) [with unsigned int SPAN = 128]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type' {aka 'unsigned int'} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:18:16: required from here /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set > >, std::less > > >, std::allocator > > > >::size_type' {aka 'unsigned int'} [-Wformat=] In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<32>&}; _Tp = gatb::core::debruijn::impl::markedSeq<32>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 128]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<64>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<64>::KmerCanonical; unsigned int span = 64]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t)::UniquifyKeys::operator()(const gatb::core::bank::Sequence&) [with int SPAN = 64]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<64>&}; _Tp = gatb::core::debruijn::impl::markedSeq<64>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator' {aka '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, bool) [with unsigned int SPAN = 128]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<32>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<32>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator' {aka '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/char_traits.h:39, from /usr/include/c++/8/string:40, from /<>/gatb-core/src/gatb/tools/storage/api/ICell.hpp:32, from /<>/gatb-core/src/gatb/tools/storage/impl/Cell.hpp:29, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:37, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algobase.h: In function 'void std::iter_swap(_ForwardIterator1, _ForwardIterator2) [with _ForwardIterator1 = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _ForwardIterator2 = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >]': /usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 iter_swap(_ForwardIterator1 __a, _ForwardIterator2 __b) ^~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 } ^ /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:84:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::iter_swap(__result, __b); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:86:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::iter_swap(__result, __c); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:88:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::iter_swap(__result, __a); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<64>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<64>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 32]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 128]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 64]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, bool) [with unsigned int SPAN = 32]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<4>&}; _Tp = gatb::core::tools::math::LargeInt<4>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::InsertIntoQueues::operator()(gatb::core::debruijn::impl::InsertIntoQueues::Count&) [with int SPAN = 128]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 } ^ /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator > > >; _Key = gatb::core::debruijn::impl::Path_t > >; _Val = gatb::core::debruijn::impl::Path_t > >; _KeyOfValue = std::_Identity > > >; _Compare = std::less > > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, bool) [with unsigned int SPAN = 64]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque > >, std::allocator > > > >::const_iterator' {aka 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 32]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 128]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:61, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 } ^ /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 64]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 32]::UniquifyKeys]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/designpattern/impl/Command.hpp:30, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:14, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:331:9: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 } ^ /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:331:9: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 32]::InsertTravellerKmer]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::link_tigs(std::__cxx11::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 128]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<32>::Count; Functor = gatb::core::debruijn::impl::InsertIntoQueues<32>]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, bool) [with unsigned int SPAN = 128]::': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 32]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 64]::InsertTravellerKmer]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::InsertIntoQueues::operator()(gatb::core::debruijn::impl::InsertIntoQueues::Count&) [with int SPAN = 64]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 64]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type' {aka 'unsigned int'} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:18:16: required from here /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set > >, std::less > > >, std::allocator > > > >::size_type' {aka 'unsigned int'} [-Wformat=] In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::link_tigs(std::__cxx11::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 32]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, bool) [with unsigned int SPAN = 32]::': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<64>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<64>::KmerCanonical; unsigned int span = 64]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::link_tigs(std::__cxx11::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 64]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ [ 66%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, bool) [with unsigned int SPAN = 64]::': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:3: /<>/gatb-core/src/gatb/bcalm2/ograph.cpp: In member function 'void gatb::core::debruijn::impl::graph3::addtuple(std::tuple, std::allocator >, unsigned int, unsigned int, unsigned int>&)': /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:372:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation] else ^~~~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:374:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' if(minimizer==get<2>(tuple)){ ^~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:389:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation] else ^~~~ /<>/gatb-core/src/gatb/bcalm2/ograph.cpp:391:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' ++indiceUnitigs; ^~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of 'uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]': /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:747:60: required from 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, bool) [with unsigned int SPAN = 96; std::__cxx11::string = std::__cxx11::basic_string]' /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:28:9: required from here /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ [ 67%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator > > >; _Key = gatb::core::debruijn::impl::Path_t > >; _Val = gatb::core::debruijn::impl::Path_t > >; _KeyOfValue = std::_Identity > > >; _Compare = std::less > > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque > >, std::allocator > > > >::const_iterator' {aka 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 [ 67%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 32; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:6: /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 128]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:14:16: required from here /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 128]': /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 128]' /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:14:16: required from here /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] while(filenames.size() > _reduceTarget) ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 64; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 128; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ [ 67%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp In file included from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 128]': /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:956:5: required from 'void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 128; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<128>::SuperKmer]' /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:947:8: required from here /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt64'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: 'class gatb::core::tools::math::NativeInt64' declared here class NativeInt64 ^~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:6: /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 32]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:14:16: required from here /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 32]': /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 32]' /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:14:16: required from here /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] while(filenames.size() > _reduceTarget) ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 32]': /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:956:5: required from 'void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 32; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<>::SuperKmer]' /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:947:8: required from here /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt64'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: 'class gatb::core::tools::math::NativeInt64' declared here class NativeInt64 ^~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type' {aka 'unsigned int'} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:18:16: required from here /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set > >, std::less > > >, std::allocator > > > >::size_type' {aka 'unsigned int'} [-Wformat=] In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 96; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<96>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<96>::KmerCanonical; unsigned int span = 96]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:7: /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:7: /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:7: /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t)::UniquifyKeys::operator()(const gatb::core::bank::Sequence&) [with int SPAN = 96]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 128]::ptcfcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 32; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<96>&}; _Tp = gatb::core::debruijn::impl::markedSeq<96>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 64; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<2>&}; _Tp = gatb::core::tools::math::LargeInt<2>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 128; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator > > >; _Key = gatb::core::debruijn::impl::Path_t > >; _Val = gatb::core::debruijn::impl::Path_t > >; _KeyOfValue = std::_Identity > > >; _Compare = std::less > > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator' {aka '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque > >, std::allocator > > > >::const_iterator' {aka 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<96>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<96>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool)::InsertTravellerKmer::operator()(const gatb::core::bank::Sequence&) [with unsigned int SPAN = 96]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:61, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:7: /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 96]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 67%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 96; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, bool) [with unsigned int SPAN = 96]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 } ^ /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1160:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::priority_queue<_Tp, _Sequence, _Compare>::push(std::priority_queue<_Tp, _Sequence, _Compare>::value_type&&) [with _Tp = std::pair >; _Sequence = std::vector >, std::allocator > > >; _Compare = gatb::core::kmer::impl::TempCountFileMerger<128>::ptcfcomp]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::priority_queue<_Tp, _Sequence, _Compare>::push(std::priority_queue<_Tp, _Sequence, _Compare>::value_type&&) [with _Tp = std::pair >; _Sequence = std::vector >, std::allocator > > >; _Compare = gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 128]::ptcfcomp]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 96]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::priority_queue<_Tp, _Sequence, _Compare>::push(std::priority_queue<_Tp, _Sequence, _Compare>::value_type&&) [with _Tp = std::pair >; _Sequence = std::vector >, std::allocator > > >; _Compare = gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 32]::ptcfcomp]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::priority_queue<_Tp, _Sequence, _Compare>::push(std::priority_queue<_Tp, _Sequence, _Compare>::value_type&&) [with _Tp = std::pair >; _Sequence = std::vector >, std::allocator > > >; _Compare = gatb::core::kmer::impl::TempCountFileMerger<32>::ptcfcomp]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type' {aka 'unsigned int'} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:18:16: required from here /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set > >, std::less > > >, std::allocator > > > >::size_type' {aka 'unsigned int'} [-Wformat=] In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algobase.h: In function 'void std::iter_swap(_ForwardIterator1, _ForwardIterator2) [with _ForwardIterator1 = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _ForwardIterator2 = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >]': /usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 iter_swap(_ForwardIterator1 __a, _ForwardIterator2 __b) ^~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:84:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::iter_swap(__result, __b); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:86:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::iter_swap(__result, __c); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:88:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::iter_swap(__result, __a); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::InsertIntoQueues::operator()(gatb::core::debruijn::impl::InsertIntoQueues::Count&) [with int SPAN = 96]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algobase.h: In function 'void std::iter_swap(_ForwardIterator1, _ForwardIterator2) [with _ForwardIterator1 = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _ForwardIterator2 = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >]': /usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 iter_swap(_ForwardIterator1 __a, _ForwardIterator2 __b) ^~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:84:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::iter_swap(__result, __b); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:86:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::iter_swap(__result, __c); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:88:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::iter_swap(__result, __a); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algobase.h: In function 'void std::iter_swap(_ForwardIterator1, _ForwardIterator2) [with _ForwardIterator1 = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _ForwardIterator2 = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >]': /usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 iter_swap(_ForwardIterator1 __a, _ForwardIterator2 __b) ^~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:84:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::iter_swap(__result, __b); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:86:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::iter_swap(__result, __c); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:88:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::iter_swap(__result, __a); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 96]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::link_tigs(std::__cxx11::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 96]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 128]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, bool) [with unsigned int SPAN = 96]::': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<3>&}; _Tp = gatb::core::tools::math::LargeInt<3>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator > > >; _Key = gatb::core::debruijn::impl::Path_t > >; _Val = gatb::core::debruijn::impl::Path_t > >; _KeyOfValue = std::_Identity > > >; _Compare = std::less > > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 32]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque > >, std::allocator > > > >::const_iterator' {aka 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algobase.h: In function 'void std::iter_swap(_ForwardIterator1, _ForwardIterator2) [with _ForwardIterator1 = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _ForwardIterator2 = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >]': /usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 iter_swap(_ForwardIterator1 __a, _ForwardIterator2 __b) ^~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:84:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::iter_swap(__result, __b); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:86:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::iter_swap(__result, __c); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:88:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::iter_swap(__result, __a); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:61, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ [ 68%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp [ 69%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:6: /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 64]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:14:16: required from here /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 64]': /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 64]' /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:14:16: required from here /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] while(filenames.size() > _reduceTarget) ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 64]': /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:956:5: required from 'void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 64; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<64>::SuperKmer]' /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:947:8: required from here /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt64'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: 'class gatb::core::tools::math::NativeInt64' declared here class NativeInt64 ^~~~~~~~~~~ [ 69%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp [ 69%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp [ 70%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp [ 70%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp [ 70%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:6: /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 96]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:14:16: required from here /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 96]': /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 96]' /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:14:16: required from here /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] while(filenames.size() > _reduceTarget) ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 96]': /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:956:5: required from 'void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 96; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<96>::SuperKmer]' /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:947:8: required from here /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt64'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: 'class gatb::core::tools::math::NativeInt64' declared here class NativeInt64 ^~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ [ 71%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<4>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 64]::ptcfcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<1>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 32]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<2>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<4>&}; _Tp = gatb::core::tools::math::LargeInt<4>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 96]::ptcfcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<2>&}; _Tp = gatb::core::tools::math::LargeInt<2>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<4>]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::priority_queue<_Tp, _Sequence, _Compare>::push(std::priority_queue<_Tp, _Sequence, _Compare>::value_type&&) [with _Tp = std::pair >; _Sequence = std::vector >, std::allocator > > >; _Compare = gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 64]::ptcfcomp]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::priority_queue<_Tp, _Sequence, _Compare>::push(std::priority_queue<_Tp, _Sequence, _Compare>::value_type&&) [with _Tp = std::pair >; _Sequence = std::vector >, std::allocator > > >; _Compare = gatb::core::kmer::impl::TempCountFileMerger<64>::ptcfcomp]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 128]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'bool std::binary_search(_FIter, _FIter, const _Tp&) [with _FIter = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<4>]': /usr/include/c++/8/bits/stl_algo.h:2247:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 binary_search(_ForwardIterator __first, _ForwardIterator __last, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:2247:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<1>]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<2>]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 64]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:7: /<>/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function 'void gatb::core::kmer::impl::Kmer::ModelAbstract::iterateIncomingNeighbors(const Type&, Functor&, const std::bitset<4>&) const [with Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<128>::Count, gatb::core::tools::math::LargeInt<4> >::FunctorNeighbors; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]': /<>/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function 'void gatb::core::kmer::impl::Kmer::ModelAbstract::iterateOutgoingNeighbors(const Type&, Functor&, const std::bitset<4>&) const [with Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<128>::Count, gatb::core::tools::math::LargeInt<4> >::FunctorNeighbors; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]': /<>/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'bool std::binary_search(_FIter, _FIter, const _Tp&) [with _FIter = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<1>]': /usr/include/c++/8/bits/stl_algo.h:2247:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 binary_search(_ForwardIterator __first, _ForwardIterator __last, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:2247:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:7: /<>/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<32>::Count; Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<32>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<32>::Count, gatb::core::tools::math::LargeInt<1> >]': /<>/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 128]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Iterator2 = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 32]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::priority_queue<_Tp, _Sequence, _Compare>::push(std::priority_queue<_Tp, _Sequence, _Compare>::value_type&&) [with _Tp = std::pair >; _Sequence = std::vector >, std::allocator > > >; _Compare = gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 96]::ptcfcomp]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::priority_queue<_Tp, _Sequence, _Compare>::push(std::priority_queue<_Tp, _Sequence, _Compare>::value_type&&) [with _Tp = std::pair >; _Sequence = std::vector >, std::allocator > > >; _Compare = gatb::core::kmer::impl::TempCountFileMerger<96>::ptcfcomp]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 64]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 64]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 72%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 72%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp [ 72%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > > >, std::allocator > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:6: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 96]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:6: /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of 'void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 128; Abundance_t = unsigned char; NodeState_t = unsigned char]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:13:16: required from here /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:310:21: warning: unused variable 'abundance' [-Wunused-variable] Abundance_t abundance = (*_abundanceMap)[count.value]; ^~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Iterator2 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:6: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:6: /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of 'void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 32; Abundance_t = unsigned char; NodeState_t = unsigned char]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:13:16: required from here /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:310:21: warning: unused variable 'abundance' [-Wunused-variable] Abundance_t abundance = (*_abundanceMap)[count.value]; ^~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<3>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 73%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Iterator2 = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 [ 73%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > > >, std::allocator > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >'} changed in GCC 7.1 [ 75%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:6: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:6: /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of 'void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 64; Abundance_t = unsigned char; NodeState_t = unsigned char]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:13:16: required from here /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:310:21: warning: unused variable 'abundance' [-Wunused-variable] Abundance_t abundance = (*_abundanceMap)[count.value]; ^~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<3>&}; _Tp = gatb::core::tools::math::LargeInt<3>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Iterator2 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:6: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:6: /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of 'void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 96; Abundance_t = unsigned char; NodeState_t = unsigned char]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:13:16: required from here /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:310:21: warning: unused variable 'abundance' [-Wunused-variable] Abundance_t abundance = (*_abundanceMap)[count.value]; ^~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:2: /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 75%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<3>]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 96]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > > >, std::allocator > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'bool std::binary_search(_FIter, _FIter, const _Tp&) [with _FIter = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<3>]': /usr/include/c++/8/bits/stl_algo.h:2247:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 binary_search(_ForwardIterator __first, _ForwardIterator __last, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:2247:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Iterator2 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ [ 76%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:7: /<>/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function 'void gatb::core::kmer::impl::Kmer::ModelAbstract::iterateIncomingNeighbors(const Type&, Functor&, const std::bitset<4>&) const [with Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<96>::Count, gatb::core::tools::math::LargeInt<3> >::FunctorNeighbors; ModelImpl = gatb::core::kmer::impl::Kmer<96>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<96>::KmerCanonical; unsigned int span = 96]': /<>/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /<>/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<96>::Count; Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<96>::Count, gatb::core::tools::math::LargeInt<3> >]': /<>/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 96]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ [ 76%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:2: /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<64>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<64>::KmerCanonical; unsigned int span = 64]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 [ 76%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:2: /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:2: /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type' {aka 'unsigned int'} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:18:16: required from here /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set > >, std::less > > >, std::allocator > > > >::size_type' {aka 'unsigned int'} [-Wformat=] In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:2: /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<4>&}; _Tp = gatb::core::tools::math::LargeInt<4>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator > > >; _Key = gatb::core::debruijn::impl::Path_t > >; _Val = gatb::core::debruijn::impl::Path_t > >; _KeyOfValue = std::_Identity > > >; _Compare = std::less > > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/set:61, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque > >, std::allocator > > > >::const_iterator' {aka 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:2: /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 [ 77%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type' {aka 'unsigned int'} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:18:16: required from here /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set > >, std::less > > >, std::allocator > > > >::size_type' {aka 'unsigned int'} [-Wformat=] In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator > > >; _Key = gatb::core::debruijn::impl::Path_t > >; _Val = gatb::core::debruijn::impl::Path_t > >; _KeyOfValue = std::_Identity > > >; _Compare = std::less > > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque > >, std::allocator > > > >::const_iterator' {aka 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:61, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<64>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<64>::KmerCanonical; unsigned int span = 64]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 [ 77%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 128; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 77%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type' {aka 'unsigned int'} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:18:16: required from here /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set > >, std::less > > >, std::allocator > > > >::size_type' {aka 'unsigned int'} [-Wformat=] In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 32; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 64; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 [ 77%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<2>&}; _Tp = gatb::core::tools::math::LargeInt<2>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:7: /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 96; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator > > >; _Key = gatb::core::debruijn::impl::Path_t > >; _Val = gatb::core::debruijn::impl::Path_t > >; _KeyOfValue = std::_Identity > > >; _Compare = std::less > > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque > >, std::allocator > > > >::const_iterator' {aka 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 128; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:7: /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ [ 78%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 32; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ [ 79%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:7: /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type' {aka 'unsigned int'} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:18:16: required from here /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set > >, std::less > > >, std::allocator > > > >::size_type' {aka 'unsigned int'} [-Wformat=] In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 64; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:7: /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Iterator2 = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 96; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algobase.h: In function 'void std::iter_swap(_ForwardIterator1, _ForwardIterator2) [with _ForwardIterator1 = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _ForwardIterator2 = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >]': /usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 iter_swap(_ForwardIterator1 __a, _ForwardIterator2 __b) ^~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:84:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::iter_swap(__result, __b); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:86:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::iter_swap(__result, __c); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:88:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::iter_swap(__result, __a); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::__cxx11::string*, std::vector*) [with unsigned int span = 128]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<3>&}; _Tp = gatb::core::tools::math::LargeInt<3>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algobase.h: In function 'void std::iter_swap(_ForwardIterator1, _ForwardIterator2) [with _ForwardIterator1 = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _ForwardIterator2 = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >]': /usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 iter_swap(_ForwardIterator1 __a, _ForwardIterator2 __b) ^~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:84:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::iter_swap(__result, __b); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:86:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::iter_swap(__result, __c); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:88:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::iter_swap(__result, __a); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator > > >; _Key = gatb::core::debruijn::impl::Path_t > >; _Val = gatb::core::debruijn::impl::Path_t > >; _KeyOfValue = std::_Identity > > >; _Compare = std::less > > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque > >, std::allocator > > > >::const_iterator' {aka 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:61, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Iterator2 = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<128>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Iterator2 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 [ 79%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Iterator2 = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::__cxx11::string*, std::vector*) [with unsigned int span = 32]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algobase.h: In function 'void std::iter_swap(_ForwardIterator1, _ForwardIterator2) [with _ForwardIterator1 = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _ForwardIterator2 = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >]': /usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 iter_swap(_ForwardIterator1 __a, _ForwardIterator2 __b) ^~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:84:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::iter_swap(__result, __b); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:86:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::iter_swap(__result, __c); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:88:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::iter_swap(__result, __a); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algobase.h: In function 'void std::iter_swap(_ForwardIterator1, _ForwardIterator2) [with _ForwardIterator1 = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _ForwardIterator2 = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >]': /usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 iter_swap(_ForwardIterator1 __a, _ForwardIterator2 __b) ^~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:84:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::iter_swap(__result, __b); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:86:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::iter_swap(__result, __c); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:88:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::iter_swap(__result, __a); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<32>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ [ 79%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Iterator2 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > > >, std::allocator > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Iterator2 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 [ 80%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp [ 80%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<96>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<96>::KmerCanonical; unsigned int span = 96]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ [ 81%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Iterator2 = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 81%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:2: /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::__cxx11::string*, std::vector*) [with unsigned int span = 64]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 [ 82%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Iterator2 = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<64>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Iterator2 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::__cxx11::string*, std::vector*) [with unsigned int span = 96]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Iterator2 = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:2: /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<96>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 82%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_128.cpp [ 82%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_32.cpp [ 83%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_64.cpp [ 83%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_96.cpp [ 83%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Iterator2 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Iterator2 = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > > >, std::allocator > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Iterator2 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::__cxx11::string*, std::vector*) [with unsigned int span = 128]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 83%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<128>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Iterator2 = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Iterator2 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Iterator2 = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::__cxx11::string*, std::vector*) [with unsigned int span = 32]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Iterator2 = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:2: /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > > >, std::allocator > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >'} changed in GCC 7.1 [ 84%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Iterator2 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Iterator2 = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<32>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Iterator2 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > > >, std::allocator > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Iterator2 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::__cxx11::string*, std::vector*) [with unsigned int span = 64]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > > >, std::allocator > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Iterator2 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 [ 84%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_128.cpp [ 85%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_32.cpp [ 85%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_64.cpp [ 85%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o -c /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_96.cpp In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<64>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:2: /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Iterator2 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<64>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<64>::KmerCanonical; unsigned int span = 64]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:2: /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Iterator2 = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<96>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<96>::KmerCanonical; unsigned int span = 96]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /<>/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:2: /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::__cxx11::string*, std::vector*) [with unsigned int span = 96]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ [ 86%] Linking CXX static library ../lib/None/libgatbcore.a cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -P CMakeFiles/gatbcore-static.dir/cmake_clean_target.cmake cd 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CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:2: /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 /usr/bin/ranlib ../lib/None/libgatbcore.a In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<96>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algobase.h:71, from /usr/include/c++/8/vector:60, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/predefined_ops.h: In function 'bool __gnu_cxx::__ops::_Iter_less_iter::operator()(_Iterator1, _Iterator2) const [with _Iterator1 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Iterator2 = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >]': /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 operator()(_Iterator1 __it1, _Iterator2 __it2) const ^~~~~~~~ /usr/include/c++/8/bits/predefined_ops.h:42:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:81:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__a, __b)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:83:14: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:85:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:90:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__a, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:92:22: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 else if (__comp(__b, __c)) ~~~~~~^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:2: /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ make[4]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 86%] Built target gatbcore-static make -f test/unit/CMakeFiles/gatb-core-cppunit.dir/build.make test/unit/CMakeFiles/gatb-core-cppunit.dir/depend make -f tools/CMakeFiles/dbginfo.dir/build.make tools/CMakeFiles/dbginfo.dir/depend make -f tools/CMakeFiles/dbgh5.dir/build.make tools/CMakeFiles/dbgh5.dir/depend make[4]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core /<>/gatb-core/tools /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/tools /<>/obj-arm-linux-gnueabihf/tools/CMakeFiles/dbginfo.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core /<>/gatb-core/tools /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/tools /<>/obj-arm-linux-gnueabihf/tools/CMakeFiles/dbgh5.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core /<>/gatb-core/test/unit /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/test/unit /<>/obj-arm-linux-gnueabihf/test/unit/CMakeFiles/gatb-core-cppunit.dir/DependInfo.cmake --color= Scanning dependencies of target dbgh5 Scanning dependencies of target dbginfo make[4]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f tools/CMakeFiles/dbgh5.dir/build.make tools/CMakeFiles/dbgh5.dir/build make[4]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f tools/CMakeFiles/dbginfo.dir/build.make tools/CMakeFiles/dbginfo.dir/build make[4]: Entering directory '/<>/obj-arm-linux-gnueabihf' make[4]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 87%] Building CXX object tools/CMakeFiles/dbgh5.dir/dbgh5.cpp.o [ 87%] Building CXX object tools/CMakeFiles/dbginfo.dir/dbginfo.cpp.o cd /<>/obj-arm-linux-gnueabihf/tools && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/dbginfo.dir/dbginfo.cpp.o -c /<>/gatb-core/tools/dbginfo.cpp cd /<>/obj-arm-linux-gnueabihf/tools && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/dbgh5.dir/dbgh5.cpp.o -c /<>/gatb-core/tools/dbgh5.cpp Scanning dependencies of target gatb-core-cppunit make[4]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f test/unit/CMakeFiles/gatb-core-cppunit.dir/build.make test/unit/CMakeFiles/gatb-core-cppunit.dir/build make[4]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 88%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/bank/TestBank.cpp.o cd /<>/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/bank/TestBank.cpp.o -c /<>/gatb-core/test/unit/src/bank/TestBank.cpp In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:2: /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /<>/gatb-core/test/unit/src/bank/TestBank.cpp: In member function 'void gatb::tests::TestBank::bank_checkSample1_aux(const string&, gatb::core::bank::impl::BankFasta::Iterator::CommentMode_e)': /<>/gatb-core/test/unit/src/bank/TestBank.cpp:118:47: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'size_t' {aka 'unsigned int'} [-Wformat=] snprintf (buffer, sizeof(buffer), "seq%ld%s", i+1, (mode == BankFasta::Iterator::FULL ? " generic" : "")); ^~~~~~~~~~ ~~~ /<>/gatb-core/test/unit/src/bank/TestBank.cpp: In member function 'void gatb::tests::TestBank::bank_checkSample2_aux(const string&)': /<>/gatb-core/test/unit/src/bank/TestBank.cpp:187:47: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'size_t' {aka 'unsigned int'} [-Wformat=] snprintf (buffer, sizeof(buffer), "seq%ld", nbSeq+1); ^~~~~~~~ ~~~~~~~ /<>/gatb-core/test/unit/src/bank/TestBank.cpp: In member function 'void gatb::tests::TestBank::bank_perf1()': /<>/gatb-core/test/unit/src/bank/TestBank.cpp:678:17: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'u_int64_t' {aka 'long long unsigned int'} [-Wformat=] printf ("size=%ld time=%ld => rate=%.3f MB/s \n", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ totalSize, t1-t0, ~~~~~~~~~ /<>/gatb-core/test/unit/src/bank/TestBank.cpp:678:17: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'gatb::core::system::ITime::Value' {aka 'long long unsigned int'} [-Wformat=] In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core/tools/dbgh5.cpp:20: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core/tools/dbginfo.cpp:20: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 88%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/bank/TestLeon.cpp.o cd /<>/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/bank/TestLeon.cpp.o -c /<>/gatb-core/test/unit/src/bank/TestLeon.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/tools/dbgh5.cpp: In function 'void sendEmail(gatb::core::tools::misc::IProperties*, gatb::core::tools::misc::IProperties*)': /<>/gatb-core/tools/dbgh5.cpp:127:13: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result] ::system (cmd.str().c_str()); ~~~~~~~~~^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:2: /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2927:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 [ 88%] Linking CXX executable ../bin/None/dbginfo cd /<>/obj-arm-linux-gnueabihf/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/dbginfo.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/dbginfo.dir/dbginfo.cpp.o -o ../bin/None/dbginfo -Wl,-rpath,/usr/lib/arm-linux-gnueabihf/hdf5/serial: ../lib/None/libgatbcore.a -ldl -lpthread -lz /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ [ 88%] Linking CXX executable ../bin/None/dbgh5 cd /<>/obj-arm-linux-gnueabihf/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/dbgh5.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/dbgh5.dir/dbgh5.cpp.o -o ../bin/None/dbgh5 -Wl,-rpath,/usr/lib/arm-linux-gnueabihf/hdf5/serial: ../lib/None/libgatbcore.a -ldl -lpthread -lz /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/test/unit/src/bank/TestLeon.cpp:32: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core/src/gatb/bank/api/Sequence.hpp:159, from /<>/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/bin/ld: ../lib/None/libgatbcore.a(TemplateSpecialization7.cpp.in_128.cpp.o):(.rodata+0x4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../lib/None/libgatbcore.a(Simplifications.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../lib/None/libgatbcore.a(TemplateSpecialization7.cpp.in_128.cpp.o):(.data.rel.ro+0x8): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../lib/None/libgatbcore.a(Simplifications.cpp.o):(.data.rel.ro+0x0): first defined here collect2: error: ld returned 1 exit status make[4]: *** [tools/CMakeFiles/dbginfo.dir/build.make:94: bin/None/dbginfo] Error 1 make[4]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make[3]: *** [CMakeFiles/Makefile2:583: tools/CMakeFiles/dbginfo.dir/all] Error 2 make[3]: *** Waiting for unfinished jobs.... [ 88%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/bcalm/TestBcalm.cpp.o cd /<>/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/bcalm/TestBcalm.cpp.o -c /<>/gatb-core/test/unit/src/bcalm/TestBcalm.cpp /usr/bin/ld: ../lib/None/libgatbcore.a(TemplateSpecialization7.cpp.in_128.cpp.o):(.rodata+0x4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../lib/None/libgatbcore.a(Simplifications.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../lib/None/libgatbcore.a(TemplateSpecialization7.cpp.in_128.cpp.o):(.data.rel.ro+0x8): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../lib/None/libgatbcore.a(Simplifications.cpp.o):(.data.rel.ro+0x0): first defined here collect2: error: ld returned 1 exit status make[4]: *** [tools/CMakeFiles/dbgh5.dir/build.make:94: bin/None/dbgh5] Error 1 make[4]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make[3]: *** [CMakeFiles/Makefile2:620: tools/CMakeFiles/dbgh5.dir/all] Error 2 [ 89%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijn.cpp.o cd /<>/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijn.cpp.o -c /<>/gatb-core/test/unit/src/debruijn/TestDebruijn.cpp [ 89%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijnUnitigs.cpp.o cd /<>/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijnUnitigs.cpp.o -c /<>/gatb-core/test/unit/src/debruijn/TestDebruijnUnitigs.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/test/unit/src/debruijn/TestDebruijn.cpp:33: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 90%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplifications.cpp.o cd /<>/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplifications.cpp.o -c /<>/gatb-core/test/unit/src/debruijn/TestSimplifications.cpp [ 90%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplificationsUnitigs.cpp.o cd /<>/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplificationsUnitigs.cpp.o -c /<>/gatb-core/test/unit/src/debruijn/TestSimplificationsUnitigs.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/test/unit/src/debruijn/TestDebruijnUnitigs.cpp:33: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/test/unit/src/debruijn/TestSimplifications.cpp:33: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.hpp:27, from /<>/gatb-core/test/unit/src/debruijn/TestSimplificationsUnitigs.cpp:33: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 91%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDSK.cpp.o cd /<>/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDSK.cpp.o -c /<>/gatb-core/test/unit/src/kmer/TestDSK.cpp [ 91%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDebloom.cpp.o cd /<>/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDebloom.cpp.o -c /<>/gatb-core/test/unit/src/kmer/TestDebloom.cpp [ 91%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmer.cpp.o cd /<>/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmer.cpp.o -c /<>/gatb-core/test/unit/src/kmer/TestKmer.cpp [ 92%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmerBank.cpp.o cd /<>/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmerBank.cpp.o -c /<>/gatb-core/test/unit/src/kmer/TestKmerBank.cpp In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/test/unit/src/kmer/TestDebloom.cpp:25: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core/test/unit/src/kmer/TestDebloom.cpp:25: /<>/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ [ 92%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestMPHF.cpp.o cd /<>/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestMPHF.cpp.o -c /<>/gatb-core/test/unit/src/kmer/TestMPHF.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/test/unit/src/kmer/TestMPHF.cpp:27: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 93%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/main.cpp.o cd /<>/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/main.cpp.o -c /<>/gatb-core/test/unit/src/main.cpp [ 93%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/system/TestSystem.cpp.o cd /<>/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/system/TestSystem.cpp.o -c /<>/gatb-core/test/unit/src/system/TestSystem.cpp In file included from /usr/include/c++/8/set:60, from /usr/include/cppunit/extensions/TestFactoryRegistry.h:11, from /<>/gatb-core/test/unit/src/CppunitCommon.hpp:24, from /<>/gatb-core/test/unit/src/kmer/TestDebloom.cpp:19: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /usr/include/cppunit/XmlOutputter.h:13, from /<>/gatb-core/test/unit/src/CppunitCommon.hpp:34, from /<>/gatb-core/test/unit/src/kmer/TestDebloom.cpp:19: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 93%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestBag.cpp.o cd /<>/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestBag.cpp.o -c /<>/gatb-core/test/unit/src/tools/collections/TestBag.cpp [ 94%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestCollection.cpp.o cd /<>/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestCollection.cpp.o -c /<>/gatb-core/test/unit/src/tools/collections/TestCollection.cpp [ 94%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestContainer.cpp.o cd /<>/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestContainer.cpp.o -c /<>/gatb-core/test/unit/src/tools/collections/TestContainer.cpp [ 95%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestIterable.cpp.o cd /<>/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestIterable.cpp.o -c /<>/gatb-core/test/unit/src/tools/collections/TestIterable.cpp [ 95%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestMap.cpp.o cd /<>/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestMap.cpp.o -c /<>/gatb-core/test/unit/src/tools/collections/TestMap.cpp [ 95%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/designpattern/TestIterators.cpp.o cd /<>/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/designpattern/TestIterators.cpp.o -c /<>/gatb-core/test/unit/src/tools/designpattern/TestIterators.cpp [ 96%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/math/TestMath.cpp.o cd /<>/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/math/TestMath.cpp.o -c /<>/gatb-core/test/unit/src/tools/math/TestMath.cpp [ 97%] Linking CXX shared library ../lib/None/libgatbcore.so cd /<>/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/gatbcore-dynamic.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libgatbcore.so.0 -o ../lib/None/libgatbcore.so.0 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CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o In file included from /usr/include/c++/8/set:60, from /usr/include/cppunit/extensions/TestFactoryRegistry.h:11, from /<>/gatb-core/test/unit/src/CppunitCommon.hpp:24, from /<>/gatb-core/test/unit/src/tools/collections/TestCollection.cpp:19: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /usr/include/cppunit/XmlOutputter.h:13, from /<>/gatb-core/test/unit/src/CppunitCommon.hpp:34, from /<>/gatb-core/test/unit/src/tools/collections/TestCollection.cpp:19: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/test/unit/src/tools/collections/TestMap.cpp:24: /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /<>/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 97%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/misc/TestMisc.cpp.o cd /<>/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/misc/TestMisc.cpp.o -c /<>/gatb-core/test/unit/src/tools/misc/TestMisc.cpp [ 98%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/storage/TestStorage.cpp.o cd /<>/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/obj-arm-linux-gnueabihf/include -I/<>/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/storage/TestStorage.cpp.o -c /<>/gatb-core/test/unit/src/tools/storage/TestStorage.cpp In file included from /<>/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core/test/unit/src/tools/storage/TestStorage.cpp:23: /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]': /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]' /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt64'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core/test/unit/src/tools/storage/TestStorage.cpp:31: /<>/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: 'class gatb::core::tools::math::NativeInt64' declared here class NativeInt64 ^~~~~~~~~~~ /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o:(.rodata+0x0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::TraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; 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CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.rodata+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o:(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.data.rel.ro+0x0): first defined here collect2: error: ld returned 1 exit status make[4]: *** [src/CMakeFiles/gatbcore-dynamic.dir/build.make:1587: lib/None/libgatbcore.so.0] Error 1 make[4]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make[3]: *** [CMakeFiles/Makefile2:192: src/CMakeFiles/gatbcore-dynamic.dir/all] Error 2 In file included from /usr/include/c++/8/set:60, from /usr/include/cppunit/extensions/TestFactoryRegistry.h:11, from /<>/gatb-core/test/unit/src/CppunitCommon.hpp:24, from /<>/gatb-core/test/unit/src/tools/storage/TestStorage.cpp:19: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /usr/include/cppunit/XmlOutputter.h:13, from /<>/gatb-core/test/unit/src/CppunitCommon.hpp:34, from /<>/gatb-core/test/unit/src/tools/storage/TestStorage.cpp:19: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 98%] Linking CXX executable ../../bin/None/gatb-core-cppunit cd /<>/obj-arm-linux-gnueabihf/test/unit && /usr/bin/cmake -E cmake_link_script CMakeFiles/gatb-core-cppunit.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/gatb-core-cppunit.dir/src/bank/TestBank.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/bank/TestLeon.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/bcalm/TestBcalm.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijn.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijnUnitigs.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplifications.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplificationsUnitigs.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDSK.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDebloom.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmer.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmerBank.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestMPHF.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/main.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/system/TestSystem.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestBag.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestCollection.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestContainer.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestIterable.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestMap.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/designpattern/TestIterators.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/math/TestMath.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/misc/TestMisc.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/storage/TestStorage.cpp.o -o ../../bin/None/gatb-core-cppunit -Wl,-rpath,/usr/lib/arm-linux-gnueabihf/hdf5/serial: ../../lib/None/libgatbcore.a -ldl -lpthread -lz /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lcppunit /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0x0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::TraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::TraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0x1b0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::MonumentTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x1b0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0xc): multiple definition of `typeinfo for gatb::core::debruijn::impl::MonumentTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0xc): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0x368): multiple definition of `typeinfo name for gatb::core::debruijn::impl::SimplePathsTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x368): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x18): multiple definition of `typeinfo for gatb::core::debruijn::impl::SimplePathsTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0x18): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0x520): multiple definition of `typeinfo name for gatb::core::debruijn::impl::NullTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x520): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x24): multiple definition of `typeinfo for gatb::core::debruijn::impl::NullTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0x24): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0x6d4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::TerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x30): multiple definition of `typeinfo for gatb::core::debruijn::impl::TerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.data.rel.ro+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0x884): multiple definition of `typeinfo name for gatb::core::debruijn::impl::MPHFTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.rodata+0x1b0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x3c): multiple definition of `typeinfo for gatb::core::debruijn::impl::MPHFTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.data.rel.ro+0xc): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0xa38): multiple definition of `typeinfo name for gatb::core::debruijn::impl::BranchingTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.rodata+0x364): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x48): multiple definition of `typeinfo for gatb::core::debruijn::impl::BranchingTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.data.rel.ro+0x18): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization7.cpp.in_128.cpp.o):(.rodata+0x4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../../lib/None/libgatbcore.a(Simplifications.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization7.cpp.in_128.cpp.o):(.data.rel.ro+0x8): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../../lib/None/libgatbcore.a(Simplifications.cpp.o):(.data.rel.ro+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization8.cpp.in_32.cpp.o):(.rodata+0x314): multiple definition of `typeinfo name for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../../lib/None/libgatbcore.a(Simplifications.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization8.cpp.in_32.cpp.o):(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../../lib/None/libgatbcore.a(Simplifications.cpp.o):(.data.rel.ro+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization7.cpp.in_32.cpp.o):(.rodata+0x4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../../lib/None/libgatbcore.a(Simplifications.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization7.cpp.in_32.cpp.o):(.data.rel.ro+0x8): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../../lib/None/libgatbcore.a(Simplifications.cpp.o):(.data.rel.ro+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0x0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::TraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::TraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0x1b0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::MonumentTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x1b0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0xc): multiple definition of `typeinfo for gatb::core::debruijn::impl::MonumentTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0xc): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0x368): multiple definition of `typeinfo name for gatb::core::debruijn::impl::SimplePathsTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x368): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x18): multiple definition of `typeinfo for gatb::core::debruijn::impl::SimplePathsTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0x18): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0x520): multiple definition of `typeinfo name for gatb::core::debruijn::impl::NullTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x520): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x24): multiple definition of `typeinfo for gatb::core::debruijn::impl::NullTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0x24): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0x6d4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::TerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x30): multiple definition of `typeinfo for gatb::core::debruijn::impl::TerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.data.rel.ro+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0x884): multiple definition of `typeinfo name for gatb::core::debruijn::impl::MPHFTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.rodata+0x1b0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x3c): multiple definition of `typeinfo for gatb::core::debruijn::impl::MPHFTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.data.rel.ro+0xc): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0xa38): multiple definition of `typeinfo name for gatb::core::debruijn::impl::BranchingTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.rodata+0x364): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x48): multiple definition of `typeinfo for gatb::core::debruijn::impl::BranchingTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.data.rel.ro+0x18): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0xbf0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::FrontlineTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0xbf0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x54): multiple definition of `typeinfo for gatb::core::debruijn::impl::FrontlineTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x54): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0xda0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::FrontlineBranchingTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0xda0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x5c): multiple definition of `typeinfo for gatb::core::debruijn::impl::FrontlineBranchingTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x5c): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0xf58): multiple definition of `typeinfo name for gatb::core::debruijn::impl::FrontlineReachableTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0xf58): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x68): multiple definition of `typeinfo for gatb::core::debruijn::impl::FrontlineReachableTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x68): first defined here collect2: error: ld returned 1 exit status make[4]: *** [test/unit/CMakeFiles/gatb-core-cppunit.dir/build.make:425: bin/None/gatb-core-cppunit] Error 1 make[4]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make[3]: *** [CMakeFiles/Makefile2:338: test/unit/CMakeFiles/gatb-core-cppunit.dir/all] Error 2 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make[2]: *** [Makefile:155: all] Error 2 make[2]: Leaving directory '/<>/obj-arm-linux-gnueabihf' dh_auto_build: cd obj-arm-linux-gnueabihf && make -j8 "INSTALL=install --strip-program=true" returned exit code 2 make[1]: *** [debian/rules:13: override_dh_auto_build-arch] Error 2 make[1]: Leaving directory '/<>' make: *** [debian/rules:10: build] Error 2 dpkg-buildpackage: error: debian/rules build subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2018-12-26T19:40:14Z Finished -------- +------------------------------------------------------------------------------+ | Post Failed Build Commands | +------------------------------------------------------------------------------+ schroot -d / -c sid-armhf-sbuild-71832b57-4e9c-4bc5-b4d3-76a953d87a71 --run-session -q -u root -p -- sh -c "cd /<> && find . -type f -name core | xargs tar cf - " | cat > /chroot/rebuildd/build-gatb-core-armhf/gatb-core_1.4.1+dfsg-3.dsc-core.tar; if [ ! -s /chroot/rebuildd/build-gatb-core-armhf/gatb-core_1.4.1+dfsg-3.dsc-core.tar ]; then rm -f /chroot/rebuildd/build-gatb-core-armhf/gatb-core_1.4.1+dfsg-3.dsc-core.tar; else gzip -9 /chroot/rebuildd/build-gatb-core-armhf/gatb-core_1.4.1+dfsg-3.dsc-core.tar; fi ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- tar: Cowardly refusing to create an empty archive Try 'tar --help' or 'tar --usage' for more information. I: Finished running 'schroot -d / -c sid-armhf-sbuild-71832b57-4e9c-4bc5-b4d3-76a953d87a71 --run-session -q -u root -p -- sh -c "cd /<> && find . -type f -name core | xargs tar cf - " | cat > /chroot/rebuildd/build-gatb-core-armhf/gatb-core_1.4.1+dfsg-3.dsc-core.tar; if [ ! -s /chroot/rebuildd/build-gatb-core-armhf/gatb-core_1.4.1+dfsg-3.dsc-core.tar ]; then rm -f /chroot/rebuildd/build-gatb-core-armhf/gatb-core_1.4.1+dfsg-3.dsc-core.tar; else gzip -9 /chroot/rebuildd/build-gatb-core-armhf/gatb-core_1.4.1+dfsg-3.dsc-core.tar; fi'. Finished processing commands. -------------------------------------------------------------------------------- +------------------------------------------------------------------------------+ | Post Failed Build Commands | +------------------------------------------------------------------------------+ schroot -d / -c sid-armhf-sbuild-71832b57-4e9c-4bc5-b4d3-76a953d87a71 --run-session -q -u root -p -- sh -c "cd /<> && find . -type f -name core | xargs tar cf - " | cat > /chroot/rebuildd/build-gatb-core-armhf/gatb-core_1.4.1+dfsg-3.dsc-core.tar; if [ ! -s /chroot/rebuildd/build-gatb-core-armhf/gatb-core_1.4.1+dfsg-3.dsc-core.tar ]; then rm -f /chroot/rebuildd/build-gatb-core-armhf/gatb-core_1.4.1+dfsg-3.dsc-core.tar; else gzip -9 /chroot/rebuildd/build-gatb-core-armhf/gatb-core_1.4.1+dfsg-3.dsc-core.tar; fi ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- tar: Cowardly refusing to create an empty archive Try 'tar --help' or 'tar --usage' for more information. I: Finished running 'schroot -d / -c sid-armhf-sbuild-71832b57-4e9c-4bc5-b4d3-76a953d87a71 --run-session -q -u root -p -- sh -c "cd /<> && find . -type f -name core | xargs tar cf - " | cat > /chroot/rebuildd/build-gatb-core-armhf/gatb-core_1.4.1+dfsg-3.dsc-core.tar; if [ ! -s /chroot/rebuildd/build-gatb-core-armhf/gatb-core_1.4.1+dfsg-3.dsc-core.tar ]; then rm -f /chroot/rebuildd/build-gatb-core-armhf/gatb-core_1.4.1+dfsg-3.dsc-core.tar; else gzip -9 /chroot/rebuildd/build-gatb-core-armhf/gatb-core_1.4.1+dfsg-3.dsc-core.tar; fi'. Finished processing commands. -------------------------------------------------------------------------------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: armhf Build Type: binary Build-Space: n/a Build-Time: 842 Distribution: sid Fail-Stage: build Host Architecture: armhf Install-Time: 182 Job: /chroot/rebuildd/build-gatb-core-armhf/gatb-core_1.4.1+dfsg-3.dsc Machine Architecture: arm64 Package: gatb-core Package-Time: 1142 Source-Version: 1.4.1+dfsg-3 Space: n/a Status: attempted Version: 1.4.1+dfsg-3 -------------------------------------------------------------------------------- Finished at 2018-12-26T19:40:14Z Build needed 00:19:02, no disk space E: Build failure (dpkg-buildpackage died) mv: target '/chroot/rebuildd/out-gatb-core' is not a directory